Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cfla_1749 |
Symbol | |
ID | 9145638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cellulomonas flavigena DSM 20109 |
Kingdom | Bacteria |
Replicon accession | NC_014151 |
Strand | - |
Start bp | 1946378 |
End bp | 1947130 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003636845 |
Protein GI | 296129595 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.617375 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00378807 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | GTGACGCTCG ACGCGCACCT GCAGGTGACG CGCGGGCAGT TCACGCTCGA CGTCGCGCTG CACGTCCCGG CAGGAGCCGT GCTCGCCGTC ATGGGGCCCA ACGGCAGCGG CAAGACGACG CTCGTCGAGT CGCTCGCCGG GGCGGTCGCG CTCACGGCCG GCCACATCAC GCTCGACGAA CGGTCGCTCG CCGACGCGGC GCGTGGCGTG CACCTGCCTC CGCGCGAGCG CGGGCTGGGC GTCTGCCTGC AGGACGGCGC GCTGTTCGGG CACCTGTCGG CGCGCGAGAA CGTCGCGTTC GGCCCTCGGG CGCAGGGCGT GCGGGCCCGC GACGCACGCG CCGTGGCCGA CTCCCTGCTC GCCGAGCTCG ACCTCGGCGA GCACGCACGT ACGCACGCCG AGAGGCTCTC GGGCGGCCAG GCGCAGCGCG TCGCGGTCGC TCGTGCGCTC GCGGCGCGCC CCCGGGCGCT GCTGCTCGAC GAGCCGTTCG GCGCCCTCGA CCCCGCCACG CGACCGCTCG TGCGCGAGGT CGTCCGTCGG CGCGTCGCGC GCGGCCTGCC GGCGGTGCTG GTGACGCACG ACGTGCGCGA CGCCCTCGAC CTCGCCGACG AGCTCGTCGT CCTGCTCGAC GGACGCGTGG CGCAGCGCGG TCGGGCGGCC GAGCTCGTGT CGGCGCCGGC GACACCCGAG GTCGCGCGCG TCGTGGGGGC TCGGCCGCCG CCCACGGACC CGGCGTCGCC CGGCGCGACG TAG
|
Protein sequence | MTLDAHLQVT RGQFTLDVAL HVPAGAVLAV MGPNGSGKTT LVESLAGAVA LTAGHITLDE RSLADAARGV HLPPRERGLG VCLQDGALFG HLSARENVAF GPRAQGVRAR DARAVADSLL AELDLGEHAR THAERLSGGQ AQRVAVARAL AARPRALLLD EPFGALDPAT RPLVREVVRR RVARGLPAVL VTHDVRDALD LADELVVLLD GRVAQRGRAA ELVSAPATPE VARVVGARPP PTDPASPGAT
|
| |