Gene Cfla_1742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCfla_1742 
Symbol 
ID9145631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCellulomonas flavigena DSM 20109 
KingdomBacteria 
Replicon accessionNC_014151 
Strand
Start bp1937867 
End bp1940386 
Gene Length2520 bp 
Protein Length839 aa 
Translation table11 
GC content75% 
IMG OID 
Productmalto-oligosyltrehalose synthase 
Protein accessionYP_003636838 
Protein GI296129588 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0333079 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGACA CGACCGTCGA GCGGTCGCTC CCCGAGCGCC GCTCGGTGCG CCCGGGGCAC 
CCGGTCCCCG TCTCGACGTA CCGCGTGCAG CTGGGTGCCG ACCTGACGTT CGACGACGTC
GCGGCGCGCG TGCCGTACTA CGCGTCGCTG GGCGTCACGC ACGTGTACCT GTCCCCCGTG
CTGGCCGCGG CGCCCGGCTC GACCCACGGG TACGACGTCG TCGACCACGA CACCGTCTCG
CCCGTCCTGG GCGGCGAGGA CGGCCTGCGC CGGCTCGCGG ACGTCGCGCA CGGCGCCGGG
CTCGGCCTGG TGCTCGACAT CGTCCCCAAC CACATGGCCG TGCCCACGCC CGTCTGGCAC
AACCGGGCGC TGTGGTCCGT GCTCGCGGAC GGCTCGGACT CGCCGTTCGC CGCCTGGTTC
GACGTCGACT GGTCCGCCGG TGACGGCGCG GTGCTCATGC CCGTCCTCGG CGACCGCATC
GGCGCCGTGC TCGCGCGCGA CGAGCTCCAG CTCGCCGAGC AGGACGTCCC CGGCGTCGGA
ACGTGCACCG TGCTGCGGTA CCACGACCAC GTCTTCCCCG TGCGAGCGGG CACCGAGGCA
CTGCCGCTCG CCGAGCTCGT CGAGCGGCAG CACTACCGCC TGGCGTACTG GAAGGTCGCC
GACGAGGAGC TGAACTACCG CCGGTTCTTC GACGTCGGCA CGCTCGTCGC GGTCCGCGTC
GAGGACCCCG AGGTGTTCGA CGCGACGCAC GCGCTGGTGC TGCGCCTGCT GCGCGAGGGC
GTGGTCGACG GTCTGCGGAT CGACCACCCG GACGGGCTCG CGGACCCGGC GGGCTACCTC
GCACGGCTGC GCGAGGTGAC CGACGGTGCG TGGGTCGTGG TCGAGAAGAT CCTCGCGGGT
GCCGAGGAGC TCCCCGACGA CTGGGCGACC GCCGGGACGA CCGGGTACGA GGCGCTGTGG
CGCGTGCAGC AGGCGTTCGT CGACCCCGGC GGGGCCGCGC TGCTCGGCTC GGTCCTGCAC
CGTGTGACGG GCGACGGGTC GGACGCGTTC GAGGCGCTCG AGCAGGACGC CAAGCGCGAG
GTCGTCGACG GTCCGCTGTA CGCCGAGGTC CACCGCCTGA CGAACCTCGC GGCCGAGATC
TGCCACGACG ACCTGCGCCT GCGCGACCAC ACGTGGCGCG CGCTCGAGGA GTGCCTCGTC
GAGCTGCTCG TCGCGTTCGA CCGCTACCGC GCGTACGTCG TGCCGGGCGA GCCCGCACCG
CCGACGTCGG TCGCGGTCCT CACCACCGCC GCGCAGCGAG CGCGTCGGCG GCTCGGTGCC
GAGCGCGAGG CGACGATGGA CGTCCTGGTC GACCTGCTGC TCGGCCGCGA GGCCGGCTCG
GCAGGACGCA CCCGCGACCC ACGCCGTGAC GAGCTCGTCG TGCGGTTCCA GCAGACGTGC
GGTGCCGTCA TGGCCAAGGG CGTCGAGGAC ACCGCGTTCT ACAGGTGGAC GCACCTCGTG
GCGCTGTGCG AGGTCGGCGG CGAGCCCGTG CGGTTCGCCA CCACACCCAC CGATCTCGCG
GCGTGGGCCG CGCAGGCCCA GGCCTCCGCG CCGCTGGGCA TGACCACCCT GTCGACGCAC
GACACCAAGC GCGGCGAGGA CACGCGCGCC CGCCTGGGGG TGCTGTCCGA GCTGCCGCAC
GAGTGGTCGG CCCTGGTGGA GGACCTGCGA CGGGTGTCCG CGTCCTACCG CGGCACGCTG
CTCGACGGTC GCACCGAGTA CCTGCTGTGG CAGACGCTCG CCGGCACGTG GACCGACGAC
GGTCCGATCG AGGAGGACCG CCTCGTCGAG TACGTGACGA AGGCGGTGCG CGAGGCCAAG
AGCCGGACCA CGTGGACCGC GCCCGACGCG GCCTACGAGG ACGCCGTGCT GTCCACCGCA
CGGCGGGCCC GCACGGACCC CGAGGTCCTG GGTCTGCTGG GCGACTGGGA CCTGCGCACG
CGCGAGGCGG TGCGGGCCGC GACGCTCGGC TCCAAGCTCG TGCAGCTCAC GCTGCCGGGC
GTGGCCGACG TGTACCAGGG CACCGAGGTG CCGTTCCCGA CGCTCGTCGA CCCCGACAAC
CGCCGCCCGG TGGACGTCGA CGCGCTGGCC GCGCGCCTGG CACGCCTCGA CGAGGGCGCC
GGCCCGCGCA CCCTCGCCGA CGAGAAGCTG CTGGTCACCT CCCGGGCGCT GCGCGTGCGG
CGCGACGTGC GGGAGGCCTT CGTCGGCCCG GAGGCCGGGT TCGTGCCGCT GGGCCACTCG
TCGGGCCACG CCATGACGTA CGCGCGCACG GCGGGCGGTG AGCCGCGCGT GGTCGTCGTC
GCGACCCGCC TGGCCGCCGC CGTCGAGCGG CTCGGCGGCT GGACCGAGCA CACGGTGGCG
CTGCCGGACG GCCCGTGGCA CGACGTGCTC GCGGACCGGG CCGTGCCCGG CGGGGTGCGG
CGTGTGGCCG ACGTCCTCGA CCGGCTACCG GTCGCGCTGC TGGTGAGAGA AGGGGTCTGA
 
Protein sequence
MSDTTVERSL PERRSVRPGH PVPVSTYRVQ LGADLTFDDV AARVPYYASL GVTHVYLSPV 
LAAAPGSTHG YDVVDHDTVS PVLGGEDGLR RLADVAHGAG LGLVLDIVPN HMAVPTPVWH
NRALWSVLAD GSDSPFAAWF DVDWSAGDGA VLMPVLGDRI GAVLARDELQ LAEQDVPGVG
TCTVLRYHDH VFPVRAGTEA LPLAELVERQ HYRLAYWKVA DEELNYRRFF DVGTLVAVRV
EDPEVFDATH ALVLRLLREG VVDGLRIDHP DGLADPAGYL ARLREVTDGA WVVVEKILAG
AEELPDDWAT AGTTGYEALW RVQQAFVDPG GAALLGSVLH RVTGDGSDAF EALEQDAKRE
VVDGPLYAEV HRLTNLAAEI CHDDLRLRDH TWRALEECLV ELLVAFDRYR AYVVPGEPAP
PTSVAVLTTA AQRARRRLGA EREATMDVLV DLLLGREAGS AGRTRDPRRD ELVVRFQQTC
GAVMAKGVED TAFYRWTHLV ALCEVGGEPV RFATTPTDLA AWAAQAQASA PLGMTTLSTH
DTKRGEDTRA RLGVLSELPH EWSALVEDLR RVSASYRGTL LDGRTEYLLW QTLAGTWTDD
GPIEEDRLVE YVTKAVREAK SRTTWTAPDA AYEDAVLSTA RRARTDPEVL GLLGDWDLRT
REAVRAATLG SKLVQLTLPG VADVYQGTEV PFPTLVDPDN RRPVDVDALA ARLARLDEGA
GPRTLADEKL LVTSRALRVR RDVREAFVGP EAGFVPLGHS SGHAMTYART AGGEPRVVVV
ATRLAAAVER LGGWTEHTVA LPDGPWHDVL ADRAVPGGVR RVADVLDRLP VALLVREGV