| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_1741 |
|---|
| Symbol | |
|---|
| ID | 9145630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | - |
|---|
| Start bp | 1935988 |
|---|
| End bp | 1937865 |
|---|
| Gene Length | 1878 bp |
|---|
| Protein Length | 625 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | malto-oligosyltrehalose trehalohydrolase |
|---|
| Protein accession | YP_003636837 |
|---|
| Protein GI | 296129587 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0932578 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGGGG GGGACGCGAC GAAGGGCACG ACGGAGGGCA CGGCAGGCAG CGCACGGCGG
CTCACGCCGC GCGTGTGGGC GCCGTACCCG CAGCGCGTGG AGCTCGTGCT GCCCGGCAGC
GACGAGCGCA CGGCGATGGT GCGTGACGAC GAGGGGTGGT GGACCGCGCC TGCCCCGCTG
GCGCACGGCA CGGACTACGG GTTCTCGCTC GACGGCGGGC CGCCACGTCC CGACCCGCGC
GCCGCGTGGC TGCCCCACGG CGTGCACGGG CCGGCGCGCA CCTTCGACCC CTCGCGCTTC
ACGTGGACGG ACGCGGGGTG GAGCGGCGTC GACGTCCGCG GCGCGGTGAC GTACGAGCTG
CACGTCGGCA CGTTCACGCC CGCCGGGACG CTGGCCGCGG CGGCGGAGCG CCTCGAGCAC
CTCGTGCGGC TCGGTGTCGA CGTGGTCGAG CTGATGCCGC TCGCCGCGTT CAACGGTCGG
CACGGCTGGG GCTACGACGG CGTCTCGCTC TACGCCGTGC ACGAGCCGTA CGGCGGTCCC
GAGGCGCTGC AGGCGTTCGT CGAGGCCGCG CACGCATACG GCCTGGCGGT GTGCCTCGAC
GTCGTGCACA ACCACCTCGG CCCGTCGGGC AACTACCTGG GCGAGCTCGG TCCGTACTTC
ACGGACGCGC ACCGCACGCC GTGGGGCGAC GCGGTGAACC TCGACGGACC GGGCTCGGAG
CACGTGCGGC GGTGGATCTG CGACTCGGTC CTGGGCTGGG CACGCGACTT CCACGTCGAC
GCGTTCCGGC TCGACGCCGT GCACGCGCTG CGCGACGACT CCCCGCGCCA CCTGCTCGCC
CAGCTCTCCG ACGAGGTCGC CGACCTGGCA GCCGAGCTGG GCCGGCCGAT CGGCCTGGTC
GCGGAGTCCG ACCTCAACGA CGTCGTCAGC CTGACCACCA CGCAGGACGG CGGCTGGGGC
ATGACGGGCC AGTGGGCCGA CGACGTGCAC CACGCCGTGC ACGCCCTGGT GTCGGGCGAG
CGGCACGGCT ACTACTGCGA CTTCGGCACG CCCGAGGTGC TGCGCACGGC CCTCACGCGG
GTGTTCGTGC ACGACGGGTC GATGTCGACC TTCCGCGGGG AGCCGTGGGG GGCGCCGGTA
CCGGACGACG TCGACGGGCA CCGGTTCGTC GTGTTCGGCG CCAACCACGA CCAGGTGGGC
AACCGTGCAC TGGGCGACCG GCCGGCCGCG CACGACGACG CGGGCGGCCT CGCCGTGCGG
GCCGCGCTCG TCCTGCTCTC GCCGTTCACG CCGCTGGTGT TCATGGGCGA GGAGTGGGGC
GCCCGCACGC CGTGGCGGTT CTTCACGGAC CATCCGGAGC CGGAGCTTGC CGCCGCGGTG
CGCGAGGGTC GGACGCGGGA GTTCGGCGGG CACGGCTGGA CCGACCTCTA CGGCGGCCCG
GTCGACGTGC CGGACCCGCA GGATCCCGGG ACGTTCGCGG CGAGCGTCCT GGACTGGGAC
GAGCCGGCAC GACCGGAGCA CGCGCGCCTG CTGGAGTGGC ACCGTGTGCT CGTCGCGCTG
CGGCGCGCGG TGCCGGACCT CGCGTCCGGG GACCGCCACC GCACGTCGCT CGACGTCCAC
GAGGTCACGC CGGACGTCGA CCCGCACGGC ACGCAGGAAC CGGGCGCCGG TGGGTGGCAC
GGCGTGCTCG TGCTGCACCG CGGTGACGCA CGTGTCGTGC TCAACCTCGC GCACCGGCCC
GTCGCGGTGC CCGTGCCGGT GGCGCGCCCC GTGCGGGTGG TCGCCGCGTG GGACGGGGGC
ACGGTGCACG CGCCCGGCGG GGCGGACGAG CCGCTGGTCG TCGACGTCCC CGCCCGCAGC
GTCGTGGTAC TGGCCTGA
|
|---|
| Protein sequence | MTGGDATKGT TEGTAGSARR LTPRVWAPYP QRVELVLPGS DERTAMVRDD EGWWTAPAPL
AHGTDYGFSL DGGPPRPDPR AAWLPHGVHG PARTFDPSRF TWTDAGWSGV DVRGAVTYEL
HVGTFTPAGT LAAAAERLEH LVRLGVDVVE LMPLAAFNGR HGWGYDGVSL YAVHEPYGGP
EALQAFVEAA HAYGLAVCLD VVHNHLGPSG NYLGELGPYF TDAHRTPWGD AVNLDGPGSE
HVRRWICDSV LGWARDFHVD AFRLDAVHAL RDDSPRHLLA QLSDEVADLA AELGRPIGLV
AESDLNDVVS LTTTQDGGWG MTGQWADDVH HAVHALVSGE RHGYYCDFGT PEVLRTALTR
VFVHDGSMST FRGEPWGAPV PDDVDGHRFV VFGANHDQVG NRALGDRPAA HDDAGGLAVR
AALVLLSPFT PLVFMGEEWG ARTPWRFFTD HPEPELAAAV REGRTREFGG HGWTDLYGGP
VDVPDPQDPG TFAASVLDWD EPARPEHARL LEWHRVLVAL RRAVPDLASG DRHRTSLDVH
EVTPDVDPHG TQEPGAGGWH GVLVLHRGDA RVVLNLAHRP VAVPVPVARP VRVVAAWDGG
TVHAPGGADE PLVVDVPARS VVVLA
|
|---|
| |