Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cfla_1552 |
Symbol | |
ID | 9145438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cellulomonas flavigena DSM 20109 |
Kingdom | Bacteria |
Replicon accession | NC_014151 |
Strand | + |
Start bp | 1727388 |
End bp | 1729004 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | RNA modification enzyme, MiaB family |
Protein accession | YP_003636649 |
Protein GI | 296129399 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0045264 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTCCACGA CCCTGCCCCT GCCTGCTCCG GCGCGCGCGA CGGCGCCGCG CGCCGACGCC ACCGCGCGCC CCGGCGGCGA CGTGCTGACC TACCACGTCA AGACGCTCGG CTGCCAGATG AACGTGCACG ACTCCGAGCA CATGGCGGGC ATGCTCGAGC AGGCCGGTTA CGTGCCCGCG GATCCCGCGG ACGCCGCGGC GGACGACGTC GACGTGCTCG TCATCAACAC GTGCGCGGTG CGCGAGAACG CGGCCGACAA GCTGTACGGC AACCTGGGGC GTCTCGCGGG CACCAAGCGC TCGCGGGCCG GCGGCATGCA GATCGCGGTC GGCGGCTGCC TGGCGCAGAA GGACCGCGCC GGCATCGTCG AGCGCGCCCC GTGGGTCGAC GTCGTGTTCG GCACCCACAA CCTCGACGTG CTGCCGACGC TCCTGGAGCG GGCCCGGCAC AACGCAGCCG CGCAGGTGGA GATCGAGGAG TCGCTCAAGG TCTTCCCGAG CACGCTGCCG ACGCGCCGCG AGTCGGTGTA CGCGGGATGG GTGTCGATCA GCGTCGGGTG CAACAACACC TGCACGTTCT GCATCGTGCC GCACCTGCGC GGCAAGGAGC GTGACCGACG GCCCGGGGAC GTCCTCGCCG AGGTCGAGGC GCTCGTCGCG ACCGGCGCGA TCGAGGTGAC GCTGCTGGGT CAGAACGTGA ACTCGTACGG CGTCGGCTTC GGCGACCGGC ACGCGTTCGG CAAGCTCCTG CGGGCGGTGG GCGCCGTGCC CGGGCTGGAG CGCGTGCGGT TCACGTCGCC GCACCCCGCG GCGTTCACGG ACGACGTCAT CGAGGCGATG GCGGCGACGC CGACGGTGAT GCCGCAGCTG CACATGCCCC TGCAGTCCGG CTCGGACCGC GTGCTGCGGG CCATGCGCCG GTCGTACCGG GCGGACCGCT TCCTCGGCAT CCTCGAGCGG GTGCGCGCGG CGATCCCGCA CGCGGCGATC ACGACCGACG TCATCGTGGG CTTCCCGGGG GAGACCGAGG AGGACTTCCG CGAGACGCTG CGCGTCGTCG AGGCGTCGAG GTTCTCGTCG GCGTTCACGT TCCAGTACTC CCCGCGACCC GGTACCCCCG CCGCGGACCT GCCCGACCAG CTCCCCAAGG CTGTCGTGCA GGAGCGGTAC GAGCGGCTCG TCGCGCTGCA GGAACGCATC TCCGCCGAGG AGAACGCGGC GCAGGTCGGG CGGACGGTCG ACGTGCTCGT CGCGCAGGGC GAGGGGCGCA AGGACGGCGC CACGGCCCGC ATCTCCGGGC GGGCGGCGGA CAACCGGCTC GTGCACCTGG CGCTGCCCGT CGGGCTCGAC CCCGCCGACG CGCCCCGCCC GGGCGACCTC GTCACGGTCC AGGTCACGCA CGGCGCCCCG CACCACCTCG TCGCGGACTC GGCGCTGGCG CCCGGTGGGC TGTTCCGCGT GCGCCGGACG CGCGCGGGCG ACGCCTGGCA GGCGCGCGCG GAGGGACGCG AGGAGGAGCA CGCGCACGGC GGCAGCGGTG GGGCGTGCGG TACCGGGGCG GCGCCGGCCG GGCCCGTCGT GCTCGGGCTC CCCGCGGTGG GACGCCCGCC CGCCTGA
|
Protein sequence | MSTTLPLPAP ARATAPRADA TARPGGDVLT YHVKTLGCQM NVHDSEHMAG MLEQAGYVPA DPADAAADDV DVLVINTCAV RENAADKLYG NLGRLAGTKR SRAGGMQIAV GGCLAQKDRA GIVERAPWVD VVFGTHNLDV LPTLLERARH NAAAQVEIEE SLKVFPSTLP TRRESVYAGW VSISVGCNNT CTFCIVPHLR GKERDRRPGD VLAEVEALVA TGAIEVTLLG QNVNSYGVGF GDRHAFGKLL RAVGAVPGLE RVRFTSPHPA AFTDDVIEAM AATPTVMPQL HMPLQSGSDR VLRAMRRSYR ADRFLGILER VRAAIPHAAI TTDVIVGFPG ETEEDFRETL RVVEASRFSS AFTFQYSPRP GTPAADLPDQ LPKAVVQERY ERLVALQERI SAEENAAQVG RTVDVLVAQG EGRKDGATAR ISGRAADNRL VHLALPVGLD PADAPRPGDL VTVQVTHGAP HHLVADSALA PGGLFRVRRT RAGDAWQARA EGREEEHAHG GSGGACGTGA APAGPVVLGL PAVGRPPA
|
| |