Gene Cfla_1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCfla_1170 
Symbol 
ID9145049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCellulomonas flavigena DSM 20109 
KingdomBacteria 
Replicon accessionNC_014151 
Strand
Start bp1316934 
End bp1318583 
Gene Length1650 bp 
Protein Length549 aa 
Translation table11 
GC content72% 
IMG OID 
Product2-isopropylmalate synthase/homocitrate synthase family protein 
Protein accessionYP_003636273 
Protein GI296129023 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.253624 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCCAGC CCACGGCACC CACGCCGACC GGCGCGAGCG CGCCGCCGCC GTTCCACGTC 
TACGACACGA CGTTGCGTGA CGGCGCCCAG CAGGAGGGCA TCAACCTGTC GGTCGCCGAC
AAGCTGACGA TCGCCCCGAT GCTCGACGAG CTCGGCGTCG GCTTCATCGA GGGCGGCTGG
CCGGGCGCGG TGCCGAAGGA CACCGAGTTC TTCAAGCGGG CCGCCAAGGA GCTCGACCTG
AGGAACGCGG AGCTCGCGGC CTTCGGTGCC ACGCGCAAGG CGGGCGTGCG GGCGACCGAC
GACCCGCAGG TGCACGCGCT GCTCGACTCC GAGGCGCCCG TCGTCACGCT CGTCGCCAAG
TTCGACGTCC GGCACGTCGA GCGCGCGCTG CGCACGACCC CGGACGAAGG ACTGGCGATG
ATCACGGACA CCGTGACGTT CCTGCGGCGC GAGGGCCGGC GCGTGTTCGT CGACGCCGAG
CACTTCTTCG ACGGCTACCG GTACGACGCG GACTTCGCGC GCCGCGCCGT CGTCACGGCG
TTCGAGGCCG GTGCGGAGGT CGTCGCGCTG TGCGACACCA ACGGTGGCAT GCTGCCGGAC
TGGGTGCGCG AGATCGTGCA GGACGTCCGG GCGGTCGCCG GCCCCGACGC GCTGCTCGGG
ATGCACGCGC ACAACGACTC GGGGTGCGCG GTGGCCAACA CGCTCGCCGC GGTCGACGCG
GGCTGCACGC ACGTGCAGGG CACGGTCAAC GGGTACGGCG AGCGCACCGG CAACGCCGAC
CTGCTGTCCG TCGTGGCCAA CCTGGAGCTC AAGCTCGGCC GGCAGGTGCT CGCGCGGGAC
ACCGACACCC CCGGCGGCCT CACCGAGCTG ACGCGCATCG CGCACGCCAT CAGCGAGGTC
ACCAACATCT CGCCGTTCGC GCGTCAGCCG TACGTCGGCG CCAGCGCGTT CGCGCACAAG
GCAGGACTGC ACGCCTCGGC CATCAAGGTC GACCCCGACC TGTACCAGCA CGCGGACCCC
GAGCTCGTCG GCAACGACAT GCGGATGCTG GTGTCCGACA TGGCGGGCCG CGCCTCGATC
GAGCTCAAGG GCCGCCAGCT CGGCATCGAC CTCGCGGAGC ACCCCGACGT GCTCTCGCGC
GTCGTGCACC GCGTGAAGGA CGCCGAGGCC GCGGGGTACA CGTACGAGGC GGCCGACGCG
TCGTTCGAGC TGGTGCTCGT CGAGGAGCTC GAGGGTGCGC GGCCCGCGTA CTTCCGGGTC
GAGTCGTGGC GCACGATCGT CGAGCGCAAC GGCGGCCGCG GCACGCCCGC GACCGCCGAG
GCGACCGTCA AGCTGCACGC GGGCGGCGAG CGCATCGTCA GCACGGGGGA GGGGAACGGT
CCGGTCAACG CGCTGGACCA CGCGCTGCGC GACGCGCTGC AGCGCGTGTA CCCCGAGCTC
GCGCGCTTCG AGCTCATCGA CTTCAAGGTC CGCATCCTCG ACCAGATGCA GGGCACCGAC
GCGGTGACGC GCGTGCTCAT CGAGACCACC GACGGTCAGA CGTCATGGAG CACGGTCGGC
GTGGGGCCCA ACCTCATCGA GGCCTCGTGG GAGGCGTTGA CGGACTCGGC GATCTGGGGG
CTGCGCCACC TGGGCGTCCG CCCGCGCTGA
 
Protein sequence
MSQPTAPTPT GASAPPPFHV YDTTLRDGAQ QEGINLSVAD KLTIAPMLDE LGVGFIEGGW 
PGAVPKDTEF FKRAAKELDL RNAELAAFGA TRKAGVRATD DPQVHALLDS EAPVVTLVAK
FDVRHVERAL RTTPDEGLAM ITDTVTFLRR EGRRVFVDAE HFFDGYRYDA DFARRAVVTA
FEAGAEVVAL CDTNGGMLPD WVREIVQDVR AVAGPDALLG MHAHNDSGCA VANTLAAVDA
GCTHVQGTVN GYGERTGNAD LLSVVANLEL KLGRQVLARD TDTPGGLTEL TRIAHAISEV
TNISPFARQP YVGASAFAHK AGLHASAIKV DPDLYQHADP ELVGNDMRML VSDMAGRASI
ELKGRQLGID LAEHPDVLSR VVHRVKDAEA AGYTYEAADA SFELVLVEEL EGARPAYFRV
ESWRTIVERN GGRGTPATAE ATVKLHAGGE RIVSTGEGNG PVNALDHALR DALQRVYPEL
ARFELIDFKV RILDQMQGTD AVTRVLIETT DGQTSWSTVG VGPNLIEASW EALTDSAIWG
LRHLGVRPR