| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_1156 |
|---|
| Symbol | |
|---|
| ID | 9145035 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | + |
|---|
| Start bp | 1302682 |
|---|
| End bp | 1303653 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003636259 |
|---|
| Protein GI | 296129009 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0354846 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000104476 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAC CTGCCCGCCC CGCAGCGGGC GACCCGGCCG TCGAGGTCCG CGGGCTGCGC
AAGACGTACC GCACGACGTC GTTGCGGCAG GTCGTCGCGG TCGACCGGCT CGACCTCACG
GTGCCGTCGG GCGGGGTGCA CGGGTTCCTC GGCCCCAACG GCTCGGGCAA GACCACGACG
ATCCGCATGC TCCTGGGGCT CGTGCGGCCG GACAGCGGGT CCGTGCGGCT GCTGGGGGCT
CGCGTGCCCG ACGGGCTGCC GGCCGTCGTC GGCCGCGTGG GGGCCGTCGT CGAGGGGCCG
AGGTTCAGCC CCGACTTCTC GGGACGCCGC AATCTGCGGC TGCTCGCCGC CGCCATCGAC
GTCCCCGGCA CGAGGGTCGA GGCGGCACTG GAACGGGTCG GCCTGCGCGA GCGCGGGCAG
GACCAGTTCC GTCGGTACTC GCTCGGCATG AAGCAGCGGC TCGCGATCGC GGCCACGCTG
CTGAAGGACC CCGCGCTGCT GATCCTCGAC GAGCCGACGA ACGGGCTGGA CCCGCAGGGC
ATCCGCGACG TGCGCGCCAC GATGCGGGCG CTGGCGGACG AGGGGCGCAC CGTCCTGGTC
TCCAGCCACC TGCTCGCCGA GGTCGAGCAC GTCGCCGACA CCGTCTCGGT CGTCGCGCGG
GGGCGTCTCG TGGCCGAGGG GCGCGTCGGC GACCTGCTCG GTGGGGACGC CGCGCAGACG
GTGCGGGTGG GGGTGGCCGA TCCCGTCCGG GGGGCCCAGC TGCTCGTCGC GCACGGCTGG
AGCGTCCGCG ACGACGGGGC CGTGCTGCTC GTCTCGGGCG CACCGGGCGC GGCGGCGGTC
ACGGAGGTCC TCGCGCGCGG CGACGTCTTC CCGCACGAGG TCGGGGTCGT GCGCCGTGAC
CTGGAGTCCG TGTTCCTCGA GCTCACCGGC TCCGGTGCGC GCGCCGGTCG TGCGCCGGAG
GTCGCGGCAT GA
|
|---|
| Protein sequence | MTEPARPAAG DPAVEVRGLR KTYRTTSLRQ VVAVDRLDLT VPSGGVHGFL GPNGSGKTTT
IRMLLGLVRP DSGSVRLLGA RVPDGLPAVV GRVGAVVEGP RFSPDFSGRR NLRLLAAAID
VPGTRVEAAL ERVGLRERGQ DQFRRYSLGM KQRLAIAATL LKDPALLILD EPTNGLDPQG
IRDVRATMRA LADEGRTVLV SSHLLAEVEH VADTVSVVAR GRLVAEGRVG DLLGGDAAQT
VRVGVADPVR GAQLLVAHGW SVRDDGAVLL VSGAPGAAAV TEVLARGDVF PHEVGVVRRD
LESVFLELTG SGARAGRAPE VAA
|
|---|
| |