Gene Cfla_1122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCfla_1122 
Symbol 
ID9145001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCellulomonas flavigena DSM 20109 
KingdomBacteria 
Replicon accessionNC_014151 
Strand
Start bp1253531 
End bp1254904 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content77% 
IMG OID 
ProductDeoxyribodipyrimidine photo-lyase 
Protein accessionYP_003636225 
Protein GI296128975 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000025981 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGCCGACGA TCTGCTGGTT CCGCCGTGAC CTGCGCCTGT CCGACCACCC CGCGCTCGTC 
GCGGCGGTCG CGGAGGCCCG GGCGGCGGGT GACGAGGTCG TCGCGCTGTA CGTCGTCGAC
CCCGCCCTGT GGCGCGCCGC CGGGACGCCG CGGCTGGCGT ACCTGGCGGC GTCGCTGCGC
TCGCTCGACG AGGCGACGGG GGGCCGGCTC GTGGTGCGCC ACGGCCGGGC AGACCGGGTC
GTGCCCGCGG TCGCGCGGCA GGTCGGGGCG AGCTCGGTGC ACGTCAGCGC CGCGACCGAG
CCGTACGGAC GACGCCGGGA CGAGGCCGTC GAGGCCGCGC TGGACGTCCC GCTCGTGCGC
ACCGGCTGCC CGTACGCCGT CGCGCCGGGC CGGCTCCGCA CCGGCCAGGG CGGGCCGTAC
CAGGTCTTCA CGCCGTTCCG CGGCGCGTGG CTCGACCACG GCTGGCACGA GCCCGCACCG
CGCCCGCGTG ACGTGCCGTG GGCGGCCCTC GCGTCCGACG GCCTGCCCGA CGCCCCGGCG
ACGGACGTGA CGCTGCCCCC CGCCGGCGAG CGCGCCGCGC GCGAGCGCTG GCACGCGTTC
GTCCGCGAGG ACCTCGCAGG CTACGACGTG GACCGGAACC GGCCGGACCT CGACGTCACG
TCGTGGATGT CGGTGCACCT CAAGCACGGG GAGATCCACC CGCGCACCCT GCTCGCCGAC
CTCGCCGACG CCGGGCGCGG CGCGCGCGGC CCACTCGCGG ACTCGGTCGC CACCTACCGC
TCGGAGCTCG CCTGGCGGGA GTTCCACGCC GACGTGCTGT GGCACCACCC GGCCGCGGCG
CGCACGTCGC TGCGCGAGGT CGTGCCGCAG GACGCGTGGG CGACCGGCCC GCCGGCCGAC
CGTGCGTTCG CGGCCTGGAC CGACGGCCGC ACCGGGTACC CGCTGGTGGA CGCCGGCATG
CGGCAGCTGC GCGCACAGGG CTGGGTGCAC AACCGGGTCC GCATGGTCGT CGCGTCCTTC
CTCGTCAAGG ACCTGCACCT GCCCTGGCAG CGCGGTGCCG CGCACTTCAT GGAGTGGCTC
GTGGACGGTG ACGTGCCGCA GAACCAGCTC AACTGGCAGT GGGTCGCGGG CACCGGGCGC
GACGCGGCGC CGTACTTCCG CGTGTTCAAC CCCGTCACGC AGGCACGCAA GTTCGACCCC
GACGGGACGT ACGTGCGGCG CTGGGTCCCC GAGCTGCGCG ACGTGCCGGA CCGTGCGGTG
CACGAGCCGT GGACGCTGCC CGGCGGGCTG CCGGCCGGCT ACCCCGAGCG GGTCGTCGAC
CACGCCCACG AGCGGGAGGT GGCGCTCGCC GACCACGCGC GGCGGGCACG CTGA
 
Protein sequence
MPTICWFRRD LRLSDHPALV AAVAEARAAG DEVVALYVVD PALWRAAGTP RLAYLAASLR 
SLDEATGGRL VVRHGRADRV VPAVARQVGA SSVHVSAATE PYGRRRDEAV EAALDVPLVR
TGCPYAVAPG RLRTGQGGPY QVFTPFRGAW LDHGWHEPAP RPRDVPWAAL ASDGLPDAPA
TDVTLPPAGE RAARERWHAF VREDLAGYDV DRNRPDLDVT SWMSVHLKHG EIHPRTLLAD
LADAGRGARG PLADSVATYR SELAWREFHA DVLWHHPAAA RTSLREVVPQ DAWATGPPAD
RAFAAWTDGR TGYPLVDAGM RQLRAQGWVH NRVRMVVASF LVKDLHLPWQ RGAAHFMEWL
VDGDVPQNQL NWQWVAGTGR DAAPYFRVFN PVTQARKFDP DGTYVRRWVP ELRDVPDRAV
HEPWTLPGGL PAGYPERVVD HAHEREVALA DHARRAR