| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_1094 |
|---|
| Symbol | |
|---|
| ID | 9144973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | + |
|---|
| Start bp | 1217566 |
|---|
| End bp | 1219758 |
|---|
| Gene Length | 2193 bp |
|---|
| Protein Length | 730 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | glycoside hydrolase clan GH-D |
|---|
| Protein accession | YP_003636197 |
|---|
| Protein GI | 296128947 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0699793 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCCAGC GTCCCGACGA GACGATGTCC ACGCCGTGCG ACCCGCAGGG CGGCGCGCGG
CCGCCCGAGC TCCTGCACCT GCGGGCCGCA GGCGTCAGCC TCGTCCTCGA CCTCGCGGGG
ATGCCGCGCG TGCTGCACTG GGGTGCCGAC CTCGGTGACC TCGACGACGC TGCGCTGGCG
GACCTGCGGC TCGCCGTGCG GCCGGCACCC GCGGGGTTCC CCGTCGACGG CGAGGTCGTG
CCCTCCGTGC TGCCGTCGCA GGCCGAGGGG TGGCTGGGGA CCCCCGGCCT CACCGGATCA
CGCGCCGGGC GTTCGTGGTC CCCGCGCTTC GCGGCGGGCA CACCGTCACT GACGTCCGGC
GACGACGGCG GCGCGGTGCT CGTGGTCCCG GCTGCCGACC CGGCGACAGG CCTGGAGCTG
GAGCTCGTCG TGGAGCTCAC GCCGCAGGGG CTGGTGCGGC AGCGGGCGAC CCTCACGAGC
ACCGGGGGCG ACCCGTACGA GGTCGGCGGT CTGCTGCTCA TGCTCCCCGT GCCCGCGCGG
GCCACGACCC TCCTGGACTT CGGCGGGCAC TGGGCGCGGG AGCGCGCGCC GCAGCGCACG
GCGTTCACGC ACGGCACACG GCTGCGCGAG AACCGCCGCG GCCGCACGGG CTTCGACACC
CCGTACGTGC TGGTCGCCGG CACGGACGAC CTGGGGCACC GGCGTGGTGA GGCCTGGGGG
TGGCACGTCG CGTGGTCCGG CAACCACCGG ACGGTCGCCG AGCGCAGCCA CCACCACGCA
GGCCTGCTGG GCGGCGGTGA GCTGCTGGGA CCGGGCGAGG TGCGGCTGGC CGCGGGGGAG
TCGTACACGA GCCCGTGGGT CTACGGGTCG TACGGCGAGG ACGGGCTCGA CGCGGTCGCG
GCGCGGTTCC ACGGCTGGTT GCGGGCACGT CCGCAGCACC CGCGCAGCCC GCGCCCCGTC
ACCCTGAACA CGTGGGAGGC GGTGTACTTC GACCACGACC TCGTGCGGCT CACGGAGCTC
GCCGACGCGG CGGCGGAGGT CGGTGCCGAG CGCTTCGTGC TCGACGACGG ATGGTTCGGC
TCCCGTCGCG ACGACACCAG CGGCCTGGGC GACTGGTACG TCTCCGACGA GGTGTGGCCC
GACGGCCTCG GGGCGCTGAT CGAGCACGTC ACGGCGCGGG GGATGCAGTT CGGGCTGTGG
GTCGAGCCCG AGATGGTCAA CCCGGACTCG GACCTCGCGC GGGCCCACCC CGACTGGGTG
CTCCGCCTGC CGGACCGGCT GCCGCGGCCC GCACGCTCGC AGCAGGTGCT CGACCTGGCA
CGCCCGGAGG CGTTCGCCCA CGTCCTCGAG CGGCTCGACG CGCTGCTCAC CGAGAACGAC
ATCGCGTACC TCAAGTGGGA CCACAACCGC GACCTCGTCG ACGCAGGGCA CGGCCCCGAC
GGTGTCCCCG GTGTGCACGG GCAGACGCTC GCCGTCTACC GCCTGCTCGA CGCGCTGCGC
GCGCGGCACC CGCGCGTCGA GATCGAGTCG TGCTCGTCCG GCGGGGCGCG GGTCGACCTG
GAGATCCTGC AGCGCACCGA CCGCGTGTGG GCGTCGGACT GCATCGACGC GCTCGAGCGC
CGCTCGATCC AGTGGTGGAC GAACCTGCTG ATCCCGCTCG AGCTCATGGG GGCGCACGTC
GGGTCCTCCG CCTCCCACGT GACCGGGCGC ACCGCGTCGC TCGGGTTCCG GGCCGGCACC
GCCCTCTTCG GCCACCTCGG CATCGAGTGG GACCTGCAGC AGGCGGACGC CGACCAGCGC
GCCGAGCTCG CGTCGTGGGT CGCGCTGTAC AAGGACGTGC GCGGGCTGCT CCACACCGGC
GCGAGCGTGC ACGCGGACGG CGCCGACCCG GCGGTCCAGG TGCACGGCGT GGTCGCGCAG
GACGGGAGCG ACGCACTGTT CACGATCGCG AGCATCGCGT CGTCCGCGCA GATGCCCGCG
GGCACCGTCG CGCTGCCCGG TCTGGACCCG GCGGCGACGT ACCACGTGCG CCCGCAGGAG
CCGGGCGGCG GGTCGCGCGG CGGCTGGCCG ACGCCGTGGT GGGGCCCCGA GGGCATCCGG
ACCACGGGAC GGGTGCTGGC GAAGGTCGGT GTACGGGCAC CGCACCTGGC GCCGGAGCAG
CTCGTCCTGG TGCGGGCGAC GCGCGTGGAC TGA
|
|---|
| Protein sequence | MPQRPDETMS TPCDPQGGAR PPELLHLRAA GVSLVLDLAG MPRVLHWGAD LGDLDDAALA
DLRLAVRPAP AGFPVDGEVV PSVLPSQAEG WLGTPGLTGS RAGRSWSPRF AAGTPSLTSG
DDGGAVLVVP AADPATGLEL ELVVELTPQG LVRQRATLTS TGGDPYEVGG LLLMLPVPAR
ATTLLDFGGH WARERAPQRT AFTHGTRLRE NRRGRTGFDT PYVLVAGTDD LGHRRGEAWG
WHVAWSGNHR TVAERSHHHA GLLGGGELLG PGEVRLAAGE SYTSPWVYGS YGEDGLDAVA
ARFHGWLRAR PQHPRSPRPV TLNTWEAVYF DHDLVRLTEL ADAAAEVGAE RFVLDDGWFG
SRRDDTSGLG DWYVSDEVWP DGLGALIEHV TARGMQFGLW VEPEMVNPDS DLARAHPDWV
LRLPDRLPRP ARSQQVLDLA RPEAFAHVLE RLDALLTEND IAYLKWDHNR DLVDAGHGPD
GVPGVHGQTL AVYRLLDALR ARHPRVEIES CSSGGARVDL EILQRTDRVW ASDCIDALER
RSIQWWTNLL IPLELMGAHV GSSASHVTGR TASLGFRAGT ALFGHLGIEW DLQQADADQR
AELASWVALY KDVRGLLHTG ASVHADGADP AVQVHGVVAQ DGSDALFTIA SIASSAQMPA
GTVALPGLDP AATYHVRPQE PGGGSRGGWP TPWWGPEGIR TTGRVLAKVG VRAPHLAPEQ
LVLVRATRVD
|
|---|
| |