Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cfla_0709 |
Symbol | |
ID | 9144580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cellulomonas flavigena DSM 20109 |
Kingdom | Bacteria |
Replicon accession | NC_014151 |
Strand | - |
Start bp | 763234 |
End bp | 764811 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | sodium:neurotransmitter symporter |
Protein accession | YP_003635820 |
Protein GI | 296128570 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00000643751 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGCAGCA CACCGGCGCC CACGGAGGGC CGCACCGAGG AGGTGCGGCG GCGGGGCGGG TTCAGCTCAC GCCGCGTCTT CATCCTGGCC GCGATCGGCT CCGCCGTCGG CCTGGGCAAC ATCTGGCGCT TCCCGTACGT GGCGTACGAG AACGGTGGCG GCGCGTTCGT CATCCCCTAC CTGCTCGCCC TGCTCACCGC CGGCCTGCCG TTCCTGCTGC TCGACTACGC GCTCGGCCAC CGGTTCCGCG GCTCGGCGCC GCTGTCCTTC GCACGGCTGC GGCGCGGTAC CGAGGGCTTC GGCTGGTGGC AGGTGGCGAT CTGCACCGTC ATCGCCGTCT ACTACGCCGC CGTCATCGCG TGGGCGCTGC GGTACACGTT CTTCTCGGTC GACAAGGCGT GGGGCGACGA CCCCGAAGGG TTCTTCTTCG GCGACTTCCT GCAGGCCGGC GACGTGCGCG TCACCACCGA CGTCGTGCCC GGCGTGCTCG TGCCGCTGCT CGTCGTGTGG CTCGCGGTGC TCGCGATCAT GGCGCTGGGC GTGCAGCGCG GCATCGGCGC GACGTCCGTC GTGTTCATCC CCGTGCTGGT CGTCGCCTTC GCGGCGCTCG TCGTGCAGGC CCTGCTGCTG CCCGGCGCCG TCGACGGCCT GAACGCGTTC TTCACGCCCG ACTGGGCCGC GCTCGCCTCG CCCGGGGTGT GGGCGGCGGC GTTCGGCCAG ATCTTCTTCT CGCTGTCGAT CGGCTTCGGG ATCATGATCA CCTACGCCTC GTACACCGGG CGCCGCGAGA ACATGACGGG CTCCGGGTTC GTCGTCGGGT TCGCCAACTC CGGCTTCGAG CTGCTCGCCG GCATCGGCGT GTTCGCCGCG CTCGGCTTCA TGGCGCAGGC CTCCGGGGTC GCCGTCAACG ACGTCGTGAG CGGCGGCATC GGCCTGGCGT TCATCGCGTT CCCCACGATC ATCAGCCAGG CCCCCGCCGG CGCGCTCATC GGCGTGCTGT TCTTCGGCTC CCTCGTCATC GCGGGCGTCA CATCGCTCGT CAGCGTCCTC GAGGTCGTCA TCTCGGCGTT CCGCGACAAG TTCGAGACCA CCCGCCTCGC CGCGACCCTC GCCGTCGGTC TGCCGATCGC GCTCGTCAGC CTCGCGCTGT TCGGCACCAC CAGCGGCATC TACGTGCTCG ACGTCGTCGA CCACTTCGTC AACCAGTACG GGATCCTCGT CGTCGCGCTG GTGAGCATGC TCGTCGTCGT CTGGGCCGTG CGTGCGCTGC GCGAGCTCGG CGACCACCTC AACGAGCACG GCCACCCGCG GGCCGGCACC CTCTGGCGCA GCGTCACCAG CGTCGTCACG CCGCTGACGC TCACCGTCGT GCTCGTCACC GCGCTGCGCG ACGACCTCGC CGAACCCTAC GAGGGCTACC CGACGTGGCT GCTCGTCGTG TTCGGCTGGG GCATGGTCGT CCTGCTGCCC GTCGTCGGGT TCCTGCTGGC CCGGCTGCCG TGGCGCCGGG GCACGCACCT CGACGGGGCC CCACCCGGGA CCCCGCCCGC ACCCACGCAC GAGGAGGACC GGCGATGA
|
Protein sequence | MSSTPAPTEG RTEEVRRRGG FSSRRVFILA AIGSAVGLGN IWRFPYVAYE NGGGAFVIPY LLALLTAGLP FLLLDYALGH RFRGSAPLSF ARLRRGTEGF GWWQVAICTV IAVYYAAVIA WALRYTFFSV DKAWGDDPEG FFFGDFLQAG DVRVTTDVVP GVLVPLLVVW LAVLAIMALG VQRGIGATSV VFIPVLVVAF AALVVQALLL PGAVDGLNAF FTPDWAALAS PGVWAAAFGQ IFFSLSIGFG IMITYASYTG RRENMTGSGF VVGFANSGFE LLAGIGVFAA LGFMAQASGV AVNDVVSGGI GLAFIAFPTI ISQAPAGALI GVLFFGSLVI AGVTSLVSVL EVVISAFRDK FETTRLAATL AVGLPIALVS LALFGTTSGI YVLDVVDHFV NQYGILVVAL VSMLVVVWAV RALRELGDHL NEHGHPRAGT LWRSVTSVVT PLTLTVVLVT ALRDDLAEPY EGYPTWLLVV FGWGMVVLLP VVGFLLARLP WRRGTHLDGA PPGTPPAPTH EEDRR
|
| |