Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cfla_0578 |
Symbol | |
ID | 9144448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cellulomonas flavigena DSM 20109 |
Kingdom | Bacteria |
Replicon accession | NC_014151 |
Strand | + |
Start bp | 619504 |
End bp | 623016 |
Gene Length | 3513 bp |
Protein Length | 1170 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003635689 |
Protein GI | 296128439 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.209277 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000560244 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCGTCGC AGACCTCCAC GCTCGCACCG ACCGACGGGA CGGAGACCGC CGGCGGCGGT CCCGACGTCT CCGGCCTCGT CGACCTCGAC GGGCGCCGCT TCTACCGGAT CGCGTCCTAC GACGACCTGC CGCCGTTCTT CATGACCCTG GTCGGTGCGA GCGACCTGTG GCTGTTCATC TCCAGCACGG GCGGCGTCAC GGCCGGTCGC GAGCAGGCCG ACCGGGCGCT GTTCACCTAC ACCACCGAGG ACAAGGTCGC CGCCGGTGCG GGGCGCACCG GTGGGCTCAC CCTGCTGCGC GTCGCCACCG CACACGGCAC CGTGTTCTGG CAGCCGTTCG CGCCGCGCCG GCCCGGCGAC CCGAACGCCG TGCGCCACCT GTACAAGGAC CCGCTCGGCA CGACCCTCGT GTTCGAGGAG ACCCGCCCCG ACCTCGGCCT GCGCGTCCGT GTCACGTGGC GGACGGCCGC TCGGTTCGGC GTCGTCCGCG AGGTCGGCGT GGCCGCGATC GACCGTCACG CCGACGCCGA GGTCCTCGAC GGCCTCGTCG ACCTGCTGCC CGCGGGCGTC ACGGTGCAGA CGCAGGGCGA GCTCAGCTGC CTGCTCGACG CGTACAAGCG CGCCGAGCTC GACGACGCGA CGGGCCTCGG CCTGGTGTAC CTGAACTCGA CGCTGACCGA CAAGGCCGAC CCGAGCGAGT CGCTCGCCAC GACCGTCGCC TGGCAGGTGG GCCTCGCCGA CGTCGAGCAC CTGCTGTCGA CCCGTCACGT CGAGGCGTTC GCGGCCGGGC GGCCCGTCGT CGCCGAGCGC GAGGTCCGCG GCGAGAAGGG TGCCTACCTC GTCCGCGCCC GGCTGGCCCT GGCGCCAGGG CAGGAGCGCC GCTGGAGCGT CGTCGCCGAC ATCGACCAGA GTGCCGCCGA CGTCGTGCGT CTGCAGGAGC TGCTGGCGGA CCCGTCCGCG GCCGCGGACG CCCTCGCGGC GGACGTCGCG AGGACACGCA CCCACCTCGA CCTGCTCGTC GGCACGGCCG ACGGCGCCCA GGTGACCGGC GACGAGCTCG CGGCCGCCCA CCACCGTGCG AACGTGCTGT TCAACATCAT GCGCGGCGGT GTCCCCGCCG ACGGTTACAC GGTCAGCACG GCGGACCTGC GGGCGTTCGT CGCGCAGCGC AGCCCACGGA CCCTGACGCG CAGCGCGCCG TGGTTCGACG CCCTCGGTGC GTCGGAGCAG GTCGACGACC TCGTCGAACG TGCCGACGCC TCCGGTGACC CGGACCTGCT GCGGCTCGTG CGGGAGTACC TGCCGCTGAC GTTCAGCCGC CGGCACGGCG ACCCGAGCCG GCCGTGGAAC CGGTTCGCCA TCGCCCTGAC GGACGAGCAC GGCCGCACGC GCGTCGACTT CCAGGGCAAC TGGCGCGACA TCTTCCAGAA CTGGGAGGCC CTGGCCTGGT CGTTCCCCGA GTACGTCGAG TCGATGGTGG CGGTGTTCCT GGACGCGACG ACCGCCGACG GCTACAACCC GTACCGCATC TCGCGCTCCG GCATCGACTG GGAGGTGCCC GAGCCCGACA ACCCGTGGGC GAACATCGGC TACTGGAGCG ACCACCAGGT GATCTACCTG GTCAAGCTGC TCGAGGCGTC ACGGCGTTTC CACCCCGGAC GCCTGGAGTC GATGGTCGAT CGCGCGGTCT TCACGCACGC GGACGTGCCG TACCGCATCG CGACCTACGA CCAGACGCTC CGTGAGCCCA TCGCCACGAT CACGTTCGAC ACGACGGCCG AGGAGCGCGT GGCCCGCCGG GTGCAGGCCG AGGGCGCCGA CGGCCGGCTC GTGCACGGCC CCGACGGTGA CCTGGTGCGC GTCTCGCTCG GTGAGAAGCT GCTGCTGATC GTCCTGGCGA AGCTCGTCAA CCTGGTGCCC GACGGCGGCA TCTGGATGAA CACGCAGCGC CCCGAGTGGA ACGACGCGAA CAACGCGCTC GTCGGCAAGG GCCTGTCGGT CGTCACGCTG GCCTACCTGC GGCGCGCCCT GACGTTCGCG CGCGACCTGC TCACCGACGA CCTCACGACG ACGAGCGAGC TCGCGGACCT GCTGTCCGAC GTGCGCGGTG CCCTGGCCGC GCACGCCGAC CAGGCGTGGG CCGGGTTCGA CGACCGGGGG CGGCGGGTCG TCATGGACGC CCTCGGTGCC GCAGGGACCG CGTACCGCAC CCGGGTGTAC GCCGGTTTCA GCGGCACGCG CACGCGCGTG CCCGCGCACG CTGTGCAGGC GTTCCTCGCC GACGCCCTGA CGTACGTCGA CGCGGCGCTG CGCGCCAACC GCCGCGACGA CGGCCTCTAC CACGCGTACA ACCTGCTCGA CCTGCGCGAC GGCGCCCGGG TGGGTCACCT GCAGGAGATG CTCGAGGGGC AGGTCGCCGT GCTGTCGTCC GGACTGCTGA CGCCCGCGGA GGCGCTCGAC CTCGTCCGGG CGCTGCGCGG CAGCGCGCTG TACCGGCCGG ACCAGCACTC CTACCAGCTG TACCCCGACC GCGACCTGCC GACCTTCCTC GCGCGCAACC TGCTCACCGC CGCACAGGCG GCGGCAGCAC CGCTGCTGGG GGCGCTGGTC GCGGCCGGCG ACACGTCCGT CGTCCTGCGT GACGTGCGAG GGGACCACCG GTTCGCGCCG GGCCTGCACA ACGCGCGCGA CCTCGCCGAC GCGCTCGACG CTCTTCCCGG TCGCGTCCCC GGGGTGACGG CGCAGCAGGT CGCGCACGGG CGGGCGGCCG TGCTCGACGT GTTCGAGCAG GTCTTCCGGC ACGCGGAGTT CACGGGGCGC TCCGGGTCGT TCTTCGCGTA CGAGGGCCTC GGCAGCATCT ACTGGCACAT GGTGTCCAAG CTGCTGCTCG CCGTGCAGGA GAACCACGAG CGCGCGGTCG CCGTCGGCGC CGACGCCGGC GTCGTCGCGG GCCTCGCCGC CGCGTACGAC GACGTGCGGC GCGGGCTCGG CTACTGCAAG AGCCCCGAGG TCTACGGCGC GTTCCCGGTC GACCCGTACT CGCACACCCC GGCCGGCAGG GGCGCGCGCC AGCCCGGGAT GACCGGGCAG GTCAAGGAGG AGGTGCTCGC ACGGCTCGGG GAGCTGGGCC TGCGGGTCGA GGACGGGCGG GTCGTCGTGC GACCGGACCT GCTGCGACCC GACGAGTGGA GGACCGCCCC CACGACGTTC TCCTTCCACG ACGTCGGCCG GCGGGCGCAG GAGCTGTGGC TGCCCGCGGG GTCGCTCGCG TTCACGTTCT GCCAGGTGCC CGTCGTCTAC CGGCGGGTCG ACGCCCCGGG TGCGGCTCTC GCCGTGGTCG CGCACCGCGC CGACGGAACG CGCGTCGAGG GCGTCGGGGG CGTGCTCGAC GCCGCCACGA GCCGCTGCGT GTTCCGGCGC ACGGGGGACG TCGTCCGGAT CGACGTCCAG GTGCCGGCGC GGGAGCGTGT CCACGGACCG AGGTCCCTGG TCCGGACCGG ACGTCCCTTT TAA
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Protein sequence | MASQTSTLAP TDGTETAGGG PDVSGLVDLD GRRFYRIASY DDLPPFFMTL VGASDLWLFI SSTGGVTAGR EQADRALFTY TTEDKVAAGA GRTGGLTLLR VATAHGTVFW QPFAPRRPGD PNAVRHLYKD PLGTTLVFEE TRPDLGLRVR VTWRTAARFG VVREVGVAAI DRHADAEVLD GLVDLLPAGV TVQTQGELSC LLDAYKRAEL DDATGLGLVY LNSTLTDKAD PSESLATTVA WQVGLADVEH LLSTRHVEAF AAGRPVVAER EVRGEKGAYL VRARLALAPG QERRWSVVAD IDQSAADVVR LQELLADPSA AADALAADVA RTRTHLDLLV GTADGAQVTG DELAAAHHRA NVLFNIMRGG VPADGYTVST ADLRAFVAQR SPRTLTRSAP WFDALGASEQ VDDLVERADA SGDPDLLRLV REYLPLTFSR RHGDPSRPWN RFAIALTDEH GRTRVDFQGN WRDIFQNWEA LAWSFPEYVE SMVAVFLDAT TADGYNPYRI SRSGIDWEVP EPDNPWANIG YWSDHQVIYL VKLLEASRRF HPGRLESMVD RAVFTHADVP YRIATYDQTL REPIATITFD TTAEERVARR VQAEGADGRL VHGPDGDLVR VSLGEKLLLI VLAKLVNLVP DGGIWMNTQR PEWNDANNAL VGKGLSVVTL AYLRRALTFA RDLLTDDLTT TSELADLLSD VRGALAAHAD QAWAGFDDRG RRVVMDALGA AGTAYRTRVY AGFSGTRTRV PAHAVQAFLA DALTYVDAAL RANRRDDGLY HAYNLLDLRD GARVGHLQEM LEGQVAVLSS GLLTPAEALD LVRALRGSAL YRPDQHSYQL YPDRDLPTFL ARNLLTAAQA AAAPLLGALV AAGDTSVVLR DVRGDHRFAP GLHNARDLAD ALDALPGRVP GVTAQQVAHG RAAVLDVFEQ VFRHAEFTGR SGSFFAYEGL GSIYWHMVSK LLLAVQENHE RAVAVGADAG VVAGLAAAYD DVRRGLGYCK SPEVYGAFPV DPYSHTPAGR GARQPGMTGQ VKEEVLARLG ELGLRVEDGR VVVRPDLLRP DEWRTAPTTF SFHDVGRRAQ ELWLPAGSLA FTFCQVPVVY RRVDAPGAAL AVVAHRADGT RVEGVGGVLD AATSRCVFRR TGDVVRIDVQ VPARERVHGP RSLVRTGRPF
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