| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_0563 |
|---|
| Symbol | |
|---|
| ID | 9144432 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | - |
|---|
| Start bp | 601835 |
|---|
| End bp | 602782 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | |
|---|
| Product | HhH-GPD family protein |
|---|
| Protein accession | YP_003635674 |
|---|
| Protein GI | 296128424 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00630244 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGACGGTCG ACCCGACCGT CCGCGCCGCC CCCGGGCCCG ACGACCCGGC TGCTGCGGTA
CGTGCCGACG TCGTCACGTG GTTCGACGCG CACGCGCGCG ACCTGCCCTG GCGCGCACCG
GACCGCACCC CGTGGGGCGT CCTGGTCAGC GAGGTGATGC TGCAGCAGAC GCCCGTCGTG
CGGGTCGAGC CCGCGTGGCG CGCGTGGATG GCGCGGTGGC CGGGCCCGGC CGACCTCGCG
GCAGCGCCCA CCGCCGACGT GCTGCGCGCG TGGGACCGCC TCGGCTACCC GCGGCGCGCG
CTGTGGCTGC AGGAGTGTGC GCGCACGGTG GTCGAGCGGC ACGGCGGCGT GCTGCCCGAG
GACGAGGAGG CGCTGCTCGC GCTGCCGGGC GTCGGCCCGT ACACCGCGGC GGCCGTCCGG
GCGTTCGCGT TCGGCCGACG CTCGGTGGTG CTCGACACCA ACGTCCGGCG GGTGCTGGCA
CGCGTCGCCG CGGGCGTCGC CCTGCCGGCG CCGACGCAGA GCGCTGCCGA GACCCGGCTC
GCCGCGGCCT GGGTGCCGGA CGACGACGCC GGGGCGGCAC GCTGGTCGGC GGCGGCGATG
GAGCTGGGCG CGCTGGTGTG CACCGCCCGC GCCCCGCGCT GCGACGCGTG CCCGGTCGCC
GAGCGGTGCC GCTGGCTCGC TGCCGGCCGT CCCGCGGACG TGCACGCGCA CCGGCGCCGC
ACCCAGGCGT GGGCCGGCAC CGACCGGCAG GCCCGCGGTC GCGTCATGGC GCTGCTGCGC
GAGGCGCTCA CCCCCGTCCC GCACGACGCG GTCGCGGCGA CGTGGTCGGA CGCGGCCCAG
CTCGCCCGTT GCCTCGACGC ACTGGTGGCC GACGGCCTCG TCGTCCGTCA CGACGCCCCG
GGGGACGACC CGGACCCGGC CGTGGCGACG TACGGTCTCC CGCGCTGA
|
|---|
| Protein sequence | MTVDPTVRAA PGPDDPAAAV RADVVTWFDA HARDLPWRAP DRTPWGVLVS EVMLQQTPVV
RVEPAWRAWM ARWPGPADLA AAPTADVLRA WDRLGYPRRA LWLQECARTV VERHGGVLPE
DEEALLALPG VGPYTAAAVR AFAFGRRSVV LDTNVRRVLA RVAAGVALPA PTQSAAETRL
AAAWVPDDDA GAARWSAAAM ELGALVCTAR APRCDACPVA ERCRWLAAGR PADVHAHRRR
TQAWAGTDRQ ARGRVMALLR EALTPVPHDA VAATWSDAAQ LARCLDALVA DGLVVRHDAP
GDDPDPAVAT YGLPR
|
|---|
| |