Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cfla_0550 |
Symbol | |
ID | 9144419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cellulomonas flavigena DSM 20109 |
Kingdom | Bacteria |
Replicon accession | NC_014151 |
Strand | + |
Start bp | 588990 |
End bp | 589742 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003635662 |
Protein GI | 296128412 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00022193 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACGGCCG ACCTCGCCGG GCGTCGCGCG CTCGTGACGG GCGGGGCGAG CGGCATCGGG CGCGCGGTCG CGGTGGCGCT GGCCGCGGCC GGCGCGGACG TCGCCCTGAC GTACCTCACG CACGACCCGG CACCCGTGGT GGCCGAGATC GAGTCGATGC GACGTCTGGC GTTCGCGGTG CAGCTCGACG CGCGGCACAG CTTCGACGTC GACGCGGCGG TGTCGAGGGC GGCGAAGGCG CTCGGTGGGA TCGACATCCT CGTCAACAAC GTCGGCGGGC TCGTCGACCG GCGTCCGTTG GCGATCACGG ACGACGCGCA CTGGCACCAC GTCATGGACC TCAACCTGTC CTCGGTGTTC TACACGACGC GTGCGACGCT GCCGCTGCTG CCCCGCGGCG GCCGGATCGT GACGGTCGGT GCGCAGGCGG CGCTCAGCGG CGGGGGCACG GGTGGCGTGC CGTACGCGAC GGCGAAGGCC GCGGTCGAGG GCTTCACGCG CGCGCTCGCG CGTGAGCTCG GGCCGCGGGA GATCACGGTG AACGCGGTGG CGCCGGGTTT CGTCCGCGAC ACGCCGTTCC ACGCCGTGCA CACGCCCGAG CCGGCGCAGC GGGCCGCGGT CGCGGCGACA CCGCTGCGGC GCGCGGGGGA GCCGGCGGAC GTGGCGGCGG CGGTGCTCCA CCTGGTGTCG GACGCGGCGT CGTTCGTCAC GGGGTCGGTG CTCGACGTCA ACGGCGGGGC GTGGTTCCGG TGA
|
Protein sequence | MTADLAGRRA LVTGGASGIG RAVAVALAAA GADVALTYLT HDPAPVVAEI ESMRRLAFAV QLDARHSFDV DAAVSRAAKA LGGIDILVNN VGGLVDRRPL AITDDAHWHH VMDLNLSSVF YTTRATLPLL PRGGRIVTVG AQAALSGGGT GGVPYATAKA AVEGFTRALA RELGPREITV NAVAPGFVRD TPFHAVHTPE PAQRAAVAAT PLRRAGEPAD VAAAVLHLVS DAASFVTGSV LDVNGGAWFR
|
| |