Gene Cfla_0480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCfla_0480 
Symbol 
ID9144346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCellulomonas flavigena DSM 20109 
KingdomBacteria 
Replicon accessionNC_014151 
Strand
Start bp510218 
End bp514183 
Gene Length3966 bp 
Protein Length1321 aa 
Translation table11 
GC content78% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003635594 
Protein GI296128344 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCACAG GCAGGAGCGA CAGCGGCGTC ATCGAGGACG ACGCCGCTCT GCTGCGTGCG 
ACGCGCGAGG GCGACGCGCA GGCGTTCGGC CACCTCTACG AGCGTCACGC CGGTGCCGCG
CTCGTCGTCG CCCGGCAGTA CGTCGACTCC GCGGCGGACG CCGAGGACGT CGTCTCCGAC
GCGTTCGCCA ACGTCCACCG CGCGCTGCGC GGTGGAGGTG GACCCGAGAG CGCGTTCCGC
GCCTACCTCT TCACCGTCGT GCGTCGCGTC GCCGCGGTGC ACCGCACCGC CGGCCGCCGC
ACCGAGCCGA CCGACGACGT CGCGGTCCTC GAGACCGCCT CGACGCCCGT CGAGACCGCC
GAGGAGCCGA CGCTCGCCGG TTTCGAGCGC AGCGTCGTCG CCCGTGCGTT CCGCTCGCTG
CCCGAGCGGT GGCGCGAGGT CCTGTGGCAC AGCGAGGTCG AGGGCCTGAC GCCCGCGCAG
ATCGCGCCGA TCATCGGGCT GACCGCCAAC AGCACGGCCG CGCTCGCGTA CCGCGCGCGC
GAGGGCCTGC GCCAGGCGTA CCTCCAGCAG CACCTGCAGG ACCCGCTCGA GGACGGCTGC
CGCGCCGTGG CCGGCAAGCT CGGCGCCCAC GTGCGCGGCG GGCTCGGGGC CCGGGACACC
CGGCAGGTCG AGCAGCACCT CGACGAGTGC GCCGAGTGCC GCGTCCTCGT GCTGGAGCTC
GGGGACGTCA ACCACGGCAT GCGGGCCGTC GTCGCGCCGC TGGTCCTGGG GATCATCGGG
CTCGGGGCGC TCGCGCAGCA GCTGCCCGTG GGCGGCGGCC TGGCGGCCGG TGCGGCCGTG
CTGACCGGAT CGGGCGCGGC GGCCTCGGGC GGGACGGGTG CGGGCGGGTC CGGCGCCGCG
TCGGGTGCGG CGGCGACGAG CGCGGGAGCG GGCGCTGCCG GGACGGTCAC GGGCGCCGCT
GCCGGTGGGG GAGCAGCCGC GGGCGGTGGG GGAGCAGCCG CGGGCGCCGC GGGCGTCCTC
GCGGGGATGT CCGCCGGTGC GGTCGCCGTC GCCGTCGCCG CCGTCGTGGT CGTCGGCGCC
GCGATCGTCG GTGCCCTGCA GCTGCTGTCG GGACCCGAGG ACGCCGTCGC GGAGCCGTTG
CCCGGCGTCT CCGGCGCGTC GCAGGACGCG ACCACGTCGC CCGCTCCGGA GGCGAGCGGC
ACGCCGACGC GCGCCCCCGC ACCCACGCCC ACCGACCTCC CGGGTGACGA GGCCGAGGGC
GACGCTCCCC TGCCCGCGCG CCCGGGCCGC GCGACGCCCG GGCCGAGGCC GGACGCCCCC
GCCCCTGCGG GCGCCGCCCC CACGGCAGCG CCGGCCGTCG TCCCCACCGC CGCTCCAGCG
GCGGACCCGA CCGCGGACCC GACCGCGGAC CCGACCTCGC AGCCGACTCC CGAGCCGACC
ACCGAGCCGA CCACCGAGCC CGCCACCGCC CGGGTCGTCG TCGCCGCCCC GCAGGGCACG
ATCAGCCTCA CCGCAGGCCT CGGGCCCCAG CCGCTCGCGC TCGCCGTGAG CAACACCGGG
GGCGTCTCGG CCGCCGAGCT CGTCGCCGAG GTCGCCGTCC CGCAGGGCGT CACGCTCGCC
GCCGGCGACG CCGCTGCGGC GGGCTTCGGC TTCGCGCTCG CGGACGCCGG CACCTGGTCG
TGCGTCACGA GCGCCGCCGA CCGCCTCGCG ACCTGCACGC TGGGCGAGCT CGCGCCGGGT
GCGGAGGCGG CGCTCGAGCT CACGGTCGAC ATCGACGAGG AGTTCACCGC GTCCGGCGAC
GAGGAGGTCC GCGTGCGGGT CTCCGGTGCG ACGGGCACGT GGGAGCCGGA CCCGATCCCG
GTCGTCGTGG CGCCGTCGCC CGCGCGGCTC GCGTTCGCGG CCGGTGCGCC CGGCGAGGTC
GACCTCGTCG TGGGCCGCTC GCGCGTCGTG GACGTCCCGG TGCGCAACGC CGGCGGTACG
CCCGTGACAC GCGACCGGCC CGCCGTGGTC GAGGCCGACC TGCCGCCCGG GGTCAGCGCC
TCCGGGGCGG CCCCGTGGGT CTGCACGACC GGTGCCGGGA CCGTCGCGTG CCGGCACGGT
GCACTGGGGG CCTTCGAGAC CTCGACGCTG CGCCTGACCC TGTCGAGCGC GAGCACCGCG
ACCGCCGGCG CCGGGACCCT GCAGGTGCGG CTCGCGCCGT CCGCGCACCG CCCCGCCGAG
ACGCACGACG TCGCGTACCG CCTGCTGCGG CCCGCGTCGC TGACGAACGA CGCACCCGCC
GCGGTCGACG TCGCACCGGG CGCCACCACC GAGCTCGCCG TGAGCGTCGG CAACGCCGGC
GACCTGACCG CGAGCGGCGC CACCGCCACC CTGCAGGCCC CGGCCGGTGT CACGCTGGCC
GCCGCGGGCG AGGGCTGGAC GTGCGCCGGC ACCCCAGGTG CCGCCATCTG CACCTCCGAC
CTCGCGCCCG GCGCTCGCGG CGAGATCGCG GTCGGGCTCG ACGTGCCCGT CGGGACCGTC
GGTCCGGTGG GTGACCTCGT CGTCTCCGTC GCGGGCCCGG ACGCCGCGGG GCTCCCGGCG
CCGCGCACGG TCGCCGTCAC CGCCGTCGAG CCCGTGCTCA CCGTCGCCGA CGTCGCGGCC
GTCCTCGACG GCGTGCACGG CGGCACGCTC GCGTTCGTCG TGGGCGTCGC GGGGCAGCGT
GACGACGGTC GGCCCGCCGC GGCTGCCGGC GACGTGCAGG CCGTCGTGAC CCTGCCGCCC
GGTGTGACCG TCGCCCGCTC CGCGTCGCTG ACCAGCGAGG TGCCCGGCTG CGTGGCCGCC
GGCCGCGTCG TCACCTGCCC CCTGGGCGAG CTCGCCGCGG GTGAGCTGCG GCCCGTCGAG
ATCGGGCTGC GGGCCGCCGG CGCCGTCCTC GGCGCGGTCG ACGTGCGCGT GACCGCGACC
GGGGCGCAGC CGGTGACCAC GTCGACCCAG GTCGTCGTGG GCTCGGCGAA CCTGACACCG
GTGTGGACGG GCGTCGGTGA CCTCGAGGTC CTCGAGGTCG GAGCCCCCCT GCTCGTGTGC
GCGGACGCGC AGGGCGCCGC GTGCCCTGCG GTGGGCCGCG AGAGCGACAA CAACGGGCTC
GACATGCGCC CGGCCGACCT GGTGCCACCC CCGGGTACGC GCGCCGGTGT GCCGGTGTCG
TCGCCGACGC GGCTCGACCT GCCCGCGGAC CGGCCCGTCG TGTGGGCAGG GCTGTACTGG
TCCGGTGTGC GCGGGTCGGG CGACGCGTGG AGCGGACCGC TCGGCACCGC GCGGCTGCGC
AGCCCTGACG GCACGTGGCG CGACGTCACG GCGCAGTCCG TCACCGAGGT CAGCGACTCC
AGCGCGCGGC AGTACTACCA GGCCACCGTC GACGTGACCG ACCTCGTCGC TGCGGGCGGT
GGCGGGCAGT GGGCGCTGGC CGACGCCGCC GTCAGCGTCG GCCGCAGCGA CCGCGTGCCG
AGCTACTACG CCGGCTGGTC CCTCGTCGTC GTGCACGGCG AGCGTGCGGC CGCGGGCACG
GAGGGCGCCG CGTCGGTCAC CGTGCACCAG GGTGGTGCGT GGATCGGCTC GACGGCCACC
GCCCCCGCGT TCGTGTTCGT CGGCGAGGCC GGCGCGAGCA CCCGCATCGG CGTCGTCGCC
TGGGAGGGTG ACCGGGCCAA CCGGGGCGAC ACGCTCACGC TCTCGGGCGT CGGGGCGCTC
ACGCCGTTGC GGTGGGACGG GTCGAGGGTC GTCGGCGGTG GGTCGCCGAG CAACGCGTTC
GACTCCACCG CGACCGGGTG GACGCACCCC AACTCGCTCG GTGTCGACGC CAAGGGCTTC
GCCGAGGTCA CGCTGCCCTC GGGCGTCGGG ATGCTGACGC CCACCACGAG CAGCGACCAG
TACCTCATCG GGGTCGTCAC CGTGCGCACG TCGCAGGTGG GGGCGTCGGG GATCCTGCGG
AGCTGA
 
Protein sequence
MATGRSDSGV IEDDAALLRA TREGDAQAFG HLYERHAGAA LVVARQYVDS AADAEDVVSD 
AFANVHRALR GGGGPESAFR AYLFTVVRRV AAVHRTAGRR TEPTDDVAVL ETASTPVETA
EEPTLAGFER SVVARAFRSL PERWREVLWH SEVEGLTPAQ IAPIIGLTAN STAALAYRAR
EGLRQAYLQQ HLQDPLEDGC RAVAGKLGAH VRGGLGARDT RQVEQHLDEC AECRVLVLEL
GDVNHGMRAV VAPLVLGIIG LGALAQQLPV GGGLAAGAAV LTGSGAAASG GTGAGGSGAA
SGAAATSAGA GAAGTVTGAA AGGGAAAGGG GAAAGAAGVL AGMSAGAVAV AVAAVVVVGA
AIVGALQLLS GPEDAVAEPL PGVSGASQDA TTSPAPEASG TPTRAPAPTP TDLPGDEAEG
DAPLPARPGR ATPGPRPDAP APAGAAPTAA PAVVPTAAPA ADPTADPTAD PTSQPTPEPT
TEPTTEPATA RVVVAAPQGT ISLTAGLGPQ PLALAVSNTG GVSAAELVAE VAVPQGVTLA
AGDAAAAGFG FALADAGTWS CVTSAADRLA TCTLGELAPG AEAALELTVD IDEEFTASGD
EEVRVRVSGA TGTWEPDPIP VVVAPSPARL AFAAGAPGEV DLVVGRSRVV DVPVRNAGGT
PVTRDRPAVV EADLPPGVSA SGAAPWVCTT GAGTVACRHG ALGAFETSTL RLTLSSASTA
TAGAGTLQVR LAPSAHRPAE THDVAYRLLR PASLTNDAPA AVDVAPGATT ELAVSVGNAG
DLTASGATAT LQAPAGVTLA AAGEGWTCAG TPGAAICTSD LAPGARGEIA VGLDVPVGTV
GPVGDLVVSV AGPDAAGLPA PRTVAVTAVE PVLTVADVAA VLDGVHGGTL AFVVGVAGQR
DDGRPAAAAG DVQAVVTLPP GVTVARSASL TSEVPGCVAA GRVVTCPLGE LAAGELRPVE
IGLRAAGAVL GAVDVRVTAT GAQPVTTSTQ VVVGSANLTP VWTGVGDLEV LEVGAPLLVC
ADAQGAACPA VGRESDNNGL DMRPADLVPP PGTRAGVPVS SPTRLDLPAD RPVVWAGLYW
SGVRGSGDAW SGPLGTARLR SPDGTWRDVT AQSVTEVSDS SARQYYQATV DVTDLVAAGG
GGQWALADAA VSVGRSDRVP SYYAGWSLVV VHGERAAAGT EGAASVTVHQ GGAWIGSTAT
APAFVFVGEA GASTRIGVVA WEGDRANRGD TLTLSGVGAL TPLRWDGSRV VGGGSPSNAF
DSTATGWTHP NSLGVDAKGF AEVTLPSGVG MLTPTTSSDQ YLIGVVTVRT SQVGASGILR
S