Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cfla_0480 |
Symbol | |
ID | 9144346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cellulomonas flavigena DSM 20109 |
Kingdom | Bacteria |
Replicon accession | NC_014151 |
Strand | + |
Start bp | 510218 |
End bp | 514183 |
Gene Length | 3966 bp |
Protein Length | 1321 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003635594 |
Protein GI | 296128344 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCACAG GCAGGAGCGA CAGCGGCGTC ATCGAGGACG ACGCCGCTCT GCTGCGTGCG ACGCGCGAGG GCGACGCGCA GGCGTTCGGC CACCTCTACG AGCGTCACGC CGGTGCCGCG CTCGTCGTCG CCCGGCAGTA CGTCGACTCC GCGGCGGACG CCGAGGACGT CGTCTCCGAC GCGTTCGCCA ACGTCCACCG CGCGCTGCGC GGTGGAGGTG GACCCGAGAG CGCGTTCCGC GCCTACCTCT TCACCGTCGT GCGTCGCGTC GCCGCGGTGC ACCGCACCGC CGGCCGCCGC ACCGAGCCGA CCGACGACGT CGCGGTCCTC GAGACCGCCT CGACGCCCGT CGAGACCGCC GAGGAGCCGA CGCTCGCCGG TTTCGAGCGC AGCGTCGTCG CCCGTGCGTT CCGCTCGCTG CCCGAGCGGT GGCGCGAGGT CCTGTGGCAC AGCGAGGTCG AGGGCCTGAC GCCCGCGCAG ATCGCGCCGA TCATCGGGCT GACCGCCAAC AGCACGGCCG CGCTCGCGTA CCGCGCGCGC GAGGGCCTGC GCCAGGCGTA CCTCCAGCAG CACCTGCAGG ACCCGCTCGA GGACGGCTGC CGCGCCGTGG CCGGCAAGCT CGGCGCCCAC GTGCGCGGCG GGCTCGGGGC CCGGGACACC CGGCAGGTCG AGCAGCACCT CGACGAGTGC GCCGAGTGCC GCGTCCTCGT GCTGGAGCTC GGGGACGTCA ACCACGGCAT GCGGGCCGTC GTCGCGCCGC TGGTCCTGGG GATCATCGGG CTCGGGGCGC TCGCGCAGCA GCTGCCCGTG GGCGGCGGCC TGGCGGCCGG TGCGGCCGTG CTGACCGGAT CGGGCGCGGC GGCCTCGGGC GGGACGGGTG CGGGCGGGTC CGGCGCCGCG TCGGGTGCGG CGGCGACGAG CGCGGGAGCG GGCGCTGCCG GGACGGTCAC GGGCGCCGCT GCCGGTGGGG GAGCAGCCGC GGGCGGTGGG GGAGCAGCCG CGGGCGCCGC GGGCGTCCTC GCGGGGATGT CCGCCGGTGC GGTCGCCGTC GCCGTCGCCG CCGTCGTGGT CGTCGGCGCC GCGATCGTCG GTGCCCTGCA GCTGCTGTCG GGACCCGAGG ACGCCGTCGC GGAGCCGTTG CCCGGCGTCT CCGGCGCGTC GCAGGACGCG ACCACGTCGC CCGCTCCGGA GGCGAGCGGC ACGCCGACGC GCGCCCCCGC ACCCACGCCC ACCGACCTCC CGGGTGACGA GGCCGAGGGC GACGCTCCCC TGCCCGCGCG CCCGGGCCGC GCGACGCCCG GGCCGAGGCC GGACGCCCCC GCCCCTGCGG GCGCCGCCCC CACGGCAGCG CCGGCCGTCG TCCCCACCGC CGCTCCAGCG GCGGACCCGA CCGCGGACCC GACCGCGGAC CCGACCTCGC AGCCGACTCC CGAGCCGACC ACCGAGCCGA CCACCGAGCC CGCCACCGCC CGGGTCGTCG TCGCCGCCCC GCAGGGCACG ATCAGCCTCA CCGCAGGCCT CGGGCCCCAG CCGCTCGCGC TCGCCGTGAG CAACACCGGG GGCGTCTCGG CCGCCGAGCT CGTCGCCGAG GTCGCCGTCC CGCAGGGCGT CACGCTCGCC GCCGGCGACG CCGCTGCGGC GGGCTTCGGC TTCGCGCTCG CGGACGCCGG CACCTGGTCG TGCGTCACGA GCGCCGCCGA CCGCCTCGCG ACCTGCACGC TGGGCGAGCT CGCGCCGGGT GCGGAGGCGG CGCTCGAGCT CACGGTCGAC ATCGACGAGG AGTTCACCGC GTCCGGCGAC GAGGAGGTCC GCGTGCGGGT CTCCGGTGCG ACGGGCACGT GGGAGCCGGA CCCGATCCCG GTCGTCGTGG CGCCGTCGCC CGCGCGGCTC GCGTTCGCGG CCGGTGCGCC CGGCGAGGTC GACCTCGTCG TGGGCCGCTC GCGCGTCGTG GACGTCCCGG TGCGCAACGC CGGCGGTACG CCCGTGACAC GCGACCGGCC CGCCGTGGTC GAGGCCGACC TGCCGCCCGG GGTCAGCGCC TCCGGGGCGG CCCCGTGGGT CTGCACGACC GGTGCCGGGA CCGTCGCGTG CCGGCACGGT GCACTGGGGG CCTTCGAGAC CTCGACGCTG CGCCTGACCC TGTCGAGCGC GAGCACCGCG ACCGCCGGCG CCGGGACCCT GCAGGTGCGG CTCGCGCCGT CCGCGCACCG CCCCGCCGAG ACGCACGACG TCGCGTACCG CCTGCTGCGG CCCGCGTCGC TGACGAACGA CGCACCCGCC GCGGTCGACG TCGCACCGGG CGCCACCACC GAGCTCGCCG TGAGCGTCGG CAACGCCGGC GACCTGACCG CGAGCGGCGC CACCGCCACC CTGCAGGCCC CGGCCGGTGT CACGCTGGCC GCCGCGGGCG AGGGCTGGAC GTGCGCCGGC ACCCCAGGTG CCGCCATCTG CACCTCCGAC CTCGCGCCCG GCGCTCGCGG CGAGATCGCG GTCGGGCTCG ACGTGCCCGT CGGGACCGTC GGTCCGGTGG GTGACCTCGT CGTCTCCGTC GCGGGCCCGG ACGCCGCGGG GCTCCCGGCG CCGCGCACGG TCGCCGTCAC CGCCGTCGAG CCCGTGCTCA CCGTCGCCGA CGTCGCGGCC GTCCTCGACG GCGTGCACGG CGGCACGCTC GCGTTCGTCG TGGGCGTCGC GGGGCAGCGT GACGACGGTC GGCCCGCCGC GGCTGCCGGC GACGTGCAGG CCGTCGTGAC CCTGCCGCCC GGTGTGACCG TCGCCCGCTC CGCGTCGCTG ACCAGCGAGG TGCCCGGCTG CGTGGCCGCC GGCCGCGTCG TCACCTGCCC CCTGGGCGAG CTCGCCGCGG GTGAGCTGCG GCCCGTCGAG ATCGGGCTGC GGGCCGCCGG CGCCGTCCTC GGCGCGGTCG ACGTGCGCGT GACCGCGACC GGGGCGCAGC CGGTGACCAC GTCGACCCAG GTCGTCGTGG GCTCGGCGAA CCTGACACCG GTGTGGACGG GCGTCGGTGA CCTCGAGGTC CTCGAGGTCG GAGCCCCCCT GCTCGTGTGC GCGGACGCGC AGGGCGCCGC GTGCCCTGCG GTGGGCCGCG AGAGCGACAA CAACGGGCTC GACATGCGCC CGGCCGACCT GGTGCCACCC CCGGGTACGC GCGCCGGTGT GCCGGTGTCG TCGCCGACGC GGCTCGACCT GCCCGCGGAC CGGCCCGTCG TGTGGGCAGG GCTGTACTGG TCCGGTGTGC GCGGGTCGGG CGACGCGTGG AGCGGACCGC TCGGCACCGC GCGGCTGCGC AGCCCTGACG GCACGTGGCG CGACGTCACG GCGCAGTCCG TCACCGAGGT CAGCGACTCC AGCGCGCGGC AGTACTACCA GGCCACCGTC GACGTGACCG ACCTCGTCGC TGCGGGCGGT GGCGGGCAGT GGGCGCTGGC CGACGCCGCC GTCAGCGTCG GCCGCAGCGA CCGCGTGCCG AGCTACTACG CCGGCTGGTC CCTCGTCGTC GTGCACGGCG AGCGTGCGGC CGCGGGCACG GAGGGCGCCG CGTCGGTCAC CGTGCACCAG GGTGGTGCGT GGATCGGCTC GACGGCCACC GCCCCCGCGT TCGTGTTCGT CGGCGAGGCC GGCGCGAGCA CCCGCATCGG CGTCGTCGCC TGGGAGGGTG ACCGGGCCAA CCGGGGCGAC ACGCTCACGC TCTCGGGCGT CGGGGCGCTC ACGCCGTTGC GGTGGGACGG GTCGAGGGTC GTCGGCGGTG GGTCGCCGAG CAACGCGTTC GACTCCACCG CGACCGGGTG GACGCACCCC AACTCGCTCG GTGTCGACGC CAAGGGCTTC GCCGAGGTCA CGCTGCCCTC GGGCGTCGGG ATGCTGACGC CCACCACGAG CAGCGACCAG TACCTCATCG GGGTCGTCAC CGTGCGCACG TCGCAGGTGG GGGCGTCGGG GATCCTGCGG AGCTGA
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Protein sequence | MATGRSDSGV IEDDAALLRA TREGDAQAFG HLYERHAGAA LVVARQYVDS AADAEDVVSD AFANVHRALR GGGGPESAFR AYLFTVVRRV AAVHRTAGRR TEPTDDVAVL ETASTPVETA EEPTLAGFER SVVARAFRSL PERWREVLWH SEVEGLTPAQ IAPIIGLTAN STAALAYRAR EGLRQAYLQQ HLQDPLEDGC RAVAGKLGAH VRGGLGARDT RQVEQHLDEC AECRVLVLEL GDVNHGMRAV VAPLVLGIIG LGALAQQLPV GGGLAAGAAV LTGSGAAASG GTGAGGSGAA SGAAATSAGA GAAGTVTGAA AGGGAAAGGG GAAAGAAGVL AGMSAGAVAV AVAAVVVVGA AIVGALQLLS GPEDAVAEPL PGVSGASQDA TTSPAPEASG TPTRAPAPTP TDLPGDEAEG DAPLPARPGR ATPGPRPDAP APAGAAPTAA PAVVPTAAPA ADPTADPTAD PTSQPTPEPT TEPTTEPATA RVVVAAPQGT ISLTAGLGPQ PLALAVSNTG GVSAAELVAE VAVPQGVTLA AGDAAAAGFG FALADAGTWS CVTSAADRLA TCTLGELAPG AEAALELTVD IDEEFTASGD EEVRVRVSGA TGTWEPDPIP VVVAPSPARL AFAAGAPGEV DLVVGRSRVV DVPVRNAGGT PVTRDRPAVV EADLPPGVSA SGAAPWVCTT GAGTVACRHG ALGAFETSTL RLTLSSASTA TAGAGTLQVR LAPSAHRPAE THDVAYRLLR PASLTNDAPA AVDVAPGATT ELAVSVGNAG DLTASGATAT LQAPAGVTLA AAGEGWTCAG TPGAAICTSD LAPGARGEIA VGLDVPVGTV GPVGDLVVSV AGPDAAGLPA PRTVAVTAVE PVLTVADVAA VLDGVHGGTL AFVVGVAGQR DDGRPAAAAG DVQAVVTLPP GVTVARSASL TSEVPGCVAA GRVVTCPLGE LAAGELRPVE IGLRAAGAVL GAVDVRVTAT GAQPVTTSTQ VVVGSANLTP VWTGVGDLEV LEVGAPLLVC ADAQGAACPA VGRESDNNGL DMRPADLVPP PGTRAGVPVS SPTRLDLPAD RPVVWAGLYW SGVRGSGDAW SGPLGTARLR SPDGTWRDVT AQSVTEVSDS SARQYYQATV DVTDLVAAGG GGQWALADAA VSVGRSDRVP SYYAGWSLVV VHGERAAAGT EGAASVTVHQ GGAWIGSTAT APAFVFVGEA GASTRIGVVA WEGDRANRGD TLTLSGVGAL TPLRWDGSRV VGGGSPSNAF DSTATGWTHP NSLGVDAKGF AEVTLPSGVG MLTPTTSSDQ YLIGVVTVRT SQVGASGILR S
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