Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cfla_0179 |
Symbol | |
ID | 9144045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cellulomonas flavigena DSM 20109 |
Kingdom | Bacteria |
Replicon accession | NC_014151 |
Strand | + |
Start bp | 215198 |
End bp | 216994 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | cellulose-binding family II |
Protein accession | YP_003635297 |
Protein GI | 296128047 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00318302 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGTGGTCA CCGGTCGTGC TGTCGCCCGT GCCCTGTCGC GGCGGACCCG CGCCCGCCGC CCGGCGACGC TCCCCGTCGC GGTCGCGGCG TCGCTCGCGT TCGTCGTCGG TCTGCTCGCG CCGGTGACCG CGACCGCCGG CGCGCCGCCC GGCGTGCCGC TGCCCGACGG CGCGCTCGCG GCGGTGGGCG ACCTCACGCC CGTGCACGAC CCCGCGCTCG TCGTCGAGGG CGACACCTGG CACGTCCTCG GCACGGGGCG CGTCGACCGC GAGAACGGCG GCACGATCCA GCACTGGGTG TCCCGCGACG CGGGCGTGAC CTGGAACTAC GCGCGGACGA TCTGGCCGTC GGTGCCGACG TGGCTCGACC AGCGGATCAG CGGGCTGGAG AACCTCTGGG CGCCCGAGGT CGTCGAGCAC GACGGCACGT ACTACCTCTA CTACTCGGCG TCGCGGTTCG GCACGAACAC GTCCGTGACG GCGCTGGCGA CGAACACCAC GCTCGACCCG GCGGACCCCG CGTACCGGTG GGTCGACCAG GGTGAGGTGA TCTCGTCGCC GCAGTCCGGG CTGCCCGGGG GCATGGCGTT CAACGCGATC GACGCGGGTG TGGTCGACGT CGACGGCCGG CCCTGGATGG CGATCGGGTC GTTCTGGCAC GGGATCTTCC TCGTCGAGCT CTCGTGGCCC AGCGGCAAGC CCGTGCCGTC CTGGCGCACG ACCGCCCGGC ACCTCGCCGC CGGCCGCCCC GACGGGAACG CCGTCGAGGC GCCCTACCTG TACGCCCGCG ACGGCTGGTA CTACCTGTTC GTCTCCGAGG GTGCGTGCTG CCGCGGGACC GACTCGACCT ACCGGATCTC GGTGGGGCGC TCGCGCGACG TGACCGGCCC GTACGTCGAC CGGAACGGGC GTGACCTCGT CGCCGGCGGC GGCAGCGTGC TCCTCGAGCG GCACGGCGTG CAGGCCGGGC CCGGCGGGCA GTCGGTCTCG CAGGACGTCC TGGCGTACCA CTACTACGCG ACGAACGACG GCGGGACGCC CACCCTCGGC CTGCAGAAGC TGCGGTGGGT GGAGGGCTGG CCCGTCGCGG ACACGCGTGC CGCCGCGGCC ACCGTCACCG CGCAGCCCGC CGACGGGTCC GTCGGCCTCG GCGGCACGAC GACGCTCACG CTGGGTGCGT CCGGCTCGCC GGCACCCGTC GCCGTGTGGC AGACGTCCGC CGACGGCGGC CGCACCTGGC AGTACGCCGG CAACCAGCGC GTCGTCGACG GGCGCTCGAC GCACGTGCTG CGCGACGTGC GCGTGGAGAC GCAGGTGCGG GCGTACCTGG TGAACGCGAC GGGGACGGTG CTGACGCGGG CAGCGAGGGT GCGGCCGTCG CCGACGTCGA TGCCGAGCCC AACGCCGAGC CCGACGTCGA GCGTGACGCC GAGCCCGACG CCCTCGCCGA CCGTCGAGCC GAGCCCGACG CTCCCGGCCG CGGCGACGTG CGCGGTCGCG TACGCGGCGA CCTCCTGGGG CGACGGGTTC ACCGCATCGG TGCGGCTCAC CAACACCGGC TCGGCCCCGC TGACGTGGAC GCTGACGTTC GACCTCGCCG ACGGTCAGCG CGTGGCGCAG GGCTGGAGCG CGACGTGGGC CCAGACCGGC ACGACGGTCC GTGCGAGCGG TGCGTCGTGG AACGCCACGC TCGCCCCCGG GGCGACGGCC GACATCGGCT TCAACGGCAC CCACACGGGC AGCACCCCGG CGCCGACGTC CTTCACGGTC GCCGGCACCC CCTGCACGTC GGCCTGA
|
Protein sequence | MVVTGRAVAR ALSRRTRARR PATLPVAVAA SLAFVVGLLA PVTATAGAPP GVPLPDGALA AVGDLTPVHD PALVVEGDTW HVLGTGRVDR ENGGTIQHWV SRDAGVTWNY ARTIWPSVPT WLDQRISGLE NLWAPEVVEH DGTYYLYYSA SRFGTNTSVT ALATNTTLDP ADPAYRWVDQ GEVISSPQSG LPGGMAFNAI DAGVVDVDGR PWMAIGSFWH GIFLVELSWP SGKPVPSWRT TARHLAAGRP DGNAVEAPYL YARDGWYYLF VSEGACCRGT DSTYRISVGR SRDVTGPYVD RNGRDLVAGG GSVLLERHGV QAGPGGQSVS QDVLAYHYYA TNDGGTPTLG LQKLRWVEGW PVADTRAAAA TVTAQPADGS VGLGGTTTLT LGASGSPAPV AVWQTSADGG RTWQYAGNQR VVDGRSTHVL RDVRVETQVR AYLVNATGTV LTRAARVRPS PTSMPSPTPS PTSSVTPSPT PSPTVEPSPT LPAAATCAVA YAATSWGDGF TASVRLTNTG SAPLTWTLTF DLADGQRVAQ GWSATWAQTG TTVRASGASW NATLAPGATA DIGFNGTHTG STPAPTSFTV AGTPCTSA
|
| |