| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_0044 |
|---|
| Symbol | |
|---|
| ID | 9143909 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | - |
|---|
| Start bp | 53998 |
|---|
| End bp | 55521 |
|---|
| Gene Length | 1524 bp |
|---|
| Protein Length | 507 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | LPXTG-motif cell wall anchor domain protein |
|---|
| Protein accession | YP_003635163 |
|---|
| Protein GI | 296127913 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACGT CCATCATCCG GCGGGTCACC GCCGCGATCG GCGGCCTCGT CCTGGCCGCC
GGCGCGGCGA TGGTCGCCGC CGCCCCGGCG CAGGCGGTCA CCCTGCCCGG CAACATCGAC
CCCGCCCAGC CCCGCAGCCT CACGGTGCAC AAGTTCGCGC TCGGCCCGGC CAACGGCCAG
GTCGCCGGGA CCGGTCAGCA GCTCCCCTCC ACCGCCGGCC TCGGCACGCC GCTCCCGGGC
GCCGTGTTCA CCGCGACGCT CGTCGCCGGC GTCGACCTCA CGACGCCCGA GGGCTGGACG
ATCGCCAACA GCCTGACCCC GCAGTCGGCG TCGAACCGCC TGACCGGCAC GCCGTACACG
TCGACCCCGT CGGCGGCGGA CGGCACCGCG ACCTTCCCGA CCGGCATGCC GCTGGGCCTG
TACTACGTGC AGGAGACGGT GCTGCCGGCC GACGCGACCA ACCCGTCCGC ACCCTTCCTC
GTGTCGTTGC CGCTGCCGAC GGGCCCGTCG GGCGCCCCGG CGAACCAGTG GATCTACGAC
GTGCACGTGT ACCCGAAGAA CGCCGTCACC GAGACCACCA AGACGCGGAT CCCGGCCCCC
GCGAACTCGG CGGAGGCACG CAACCCCGAC CTCATCCGCT GGTCGATCTC GGCCAGCATC
CCGACGCTCG CCGCGGGTGA CACGATCTCC ACGTTCACCC TCACCGACAT CGTCCCGGGT
GCGCTGGTGT TCCCCGCCAC CCCGCCCGTG GGCGTCTCGC CGTCGACCGT GACGGTGACG
AACGCGGGAG GTGTCGCGCA GAGCTTCGCC GAGGGCGACG ACTACACCAT CACCACCACG
GACGCGACGG GCACGACCGA CGCGACGTCC GTGCTGAGCT TCACCACGAC GGGCCTGACC
CGGCTCACCG CCCTGCAGGG CGGGCTGGTG TCGTTCGACG TGCTGACCCG TGCCGTGTCG
ATCCCGCCCA CCGGGGTCAT CACCAACACG GCGACCGCCA ACATCAACGG CGCGACGGAG
ACCGTGACCG GCTCCACCCC GATCGGCCAG CTGACGGTCT TCGCGTTCGA GAGCAGCGGC
GGCGGCCCGC GCACCCCGCT CGCCGGAGCG GTCTACCAGG TGTACCTGAC CCAGAACGAC
GCGAACAACC AGCAGAACCC GATCTCGATC AACGGCACCA CCAGCTGGAC GACCGGCGCC
GACGGGTTCG TCGCCATCCC GATCATGACG CCCGGCAACT ACTACGTGCG TGAGATCACC
CCGCCGGCCG GCTACAACCT GCCGCAGAGC AACCCGGTCC AGACCGTGGT CGTCGCGGGT
CCGACGTCGA CCACCGCCCC GGTGCAGAAC TACGTCGAGT TCAACCACAC CCAGGTGTCC
GCGGCGAACT TCCTGCTGCC GCTGACGGGT GGCGACGCCG GCCGGTGGTT CGCGCTCGCC
GGCAGTGCGC TCCTGGCGAT CGCCGTCGGT GCGGCGGTCG TCGTGACCCG CCGGCGTGCG
CTCTCCGCGC CCGCGTCGGC CTGA
|
|---|
| Protein sequence | MSTSIIRRVT AAIGGLVLAA GAAMVAAAPA QAVTLPGNID PAQPRSLTVH KFALGPANGQ
VAGTGQQLPS TAGLGTPLPG AVFTATLVAG VDLTTPEGWT IANSLTPQSA SNRLTGTPYT
STPSAADGTA TFPTGMPLGL YYVQETVLPA DATNPSAPFL VSLPLPTGPS GAPANQWIYD
VHVYPKNAVT ETTKTRIPAP ANSAEARNPD LIRWSISASI PTLAAGDTIS TFTLTDIVPG
ALVFPATPPV GVSPSTVTVT NAGGVAQSFA EGDDYTITTT DATGTTDATS VLSFTTTGLT
RLTALQGGLV SFDVLTRAVS IPPTGVITNT ATANINGATE TVTGSTPIGQ LTVFAFESSG
GGPRTPLAGA VYQVYLTQND ANNQQNPISI NGTTSWTTGA DGFVAIPIMT PGNYYVREIT
PPAGYNLPQS NPVQTVVVAG PTSTTAPVQN YVEFNHTQVS AANFLLPLTG GDAGRWFALA
GSALLAIAVG AAVVVTRRRA LSAPASA
|
|---|
| |