| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bmur_2211 |
|---|
| Symbol | |
|---|
| ID | 9143212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachyspira murdochii DSM 12563 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014150 |
|---|
| Strand | + |
|---|
| Start bp | 2514205 |
|---|
| End bp | 2515707 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | |
|---|
| Product | Peptidoglycan-binding lysin domain protein |
|---|
| Protein accession | YP_003634484 |
|---|
| Protein GI | 296127232 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.00497018 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAG GACTATTTTT ATTTATTACT TTATCATTAT CAAGTTTATT ATATGCTCAG
GAAGAGCTGG TACTTCCTCC TGAACTTCCT GATAATTTGC CTTTGTCTAT AAAGGAAAGC
GATGATTATA AATTGGCACA GAGATACAGA GAAATGGCTT TAGAAGCACA TGATGCTGGT
GATTATAATC AAAGTATAGA ATATTCAAGA CAAAGTAAAG AATATTCTGA TAAAATTATA
TCAAGATACG GTGTTTATGA ATATGTTTTA AATAGCCAGA GAGATGCTGA AAGAAAATTG
AGTTTATTTA AAGGTGTAGG CGGAGATACC AATGAACTTA CTATGAACTT ATACAATTTA
TCAGTTAATG ATATTAATTC AGCAAATAAT ATGTTTGATT CTGCTGCCAA CAGTACAGAT
TATACAAATA CTATGCTTGA ATATAATAAA TCTTCTGAAA AATCAGAATT GGGTTATAAT
GTACTTGCTA TAGATTTGAG AAGAGAATAT TTAATCAGCG AATCAGTATT AACTAACGGA
GATGCTAATG ATACTCAAAT AACTAACTTA AGAGATGAAT CTGCAAACTT ATTAGCAAGT
AATGATTATA CAAACTCTCT AACAAAATCA AGAGATGCTA TGAGTATACT TGACAGATTA
GAAGCTCCTT TAGAATATGC AAAAGCTCAG GAAGCTATGG ATAAAGCTAA AAAAGATGGT
TATAATGAAA GCAAACCTAA TATGTATAAT GAAGCTTCAA AATCTTTATC TTCTGCCGGA
GAAACTTTGA TAGCTAATAA TTATTCAGAA TCTTTAATGC ATTCAAAAAA TGTTATTAGT
TTAGTAAATT CAATGGGTGT TTCAGGCGAT AATAATGAAG CGGTTGCAGT AACAGACGGA
GCTTTCCCTA AATATTATAC AGTTCAGGCA AGAAAAACTA ATACTGACTC TTTATGGCGT
ATAGCTTCTT ATGACTTTAT ATACGGAAAC GGTAATTTAT GGAATAAAAT ATATGAAGCT
AACAAGGATA AAATTAAAGA TCCTTCTGTA ATAAGAGCAG GACAAGTATT AACTATACCA
AGCCTTAAAG GGGAACTTAG AGAAGGTACT TATGATTCTA ATCAAACTTA TAGCAGTATA
AAAAACTTCT CTACAAATAA TCAGAGAACT TCTGAAACTA CAGTTAATGA AGAAACTGCA
GCAGAAGAAG AAACAGTAGG TGAGAATGTA GCAGTAGATG AAGAAGCGGT AATAGAAGAA
GTTGTAACAG AAGAAGAAAT GACAGAAGAA ACAGCAACAG ATGAAGAAAC AGCAAATGAA
GATATGGCAG CAGATGAAGA ATTAACAGAA GAAGATACTA TCACAGCAGA AGAGAGAGCC
GCTGTTAAAG AGGGTGAAAT TGTTGTAGAA GATGAAGAAG AAGTTCAGGA ACAAGCAGAA
GAGACAGAAA ATTCTGTTAT AGATGAACAA ATAGATAACA CTGCTGAAAC TGAAAATCAA
TAA
|
|---|
| Protein sequence | MKRGLFLFIT LSLSSLLYAQ EELVLPPELP DNLPLSIKES DDYKLAQRYR EMALEAHDAG
DYNQSIEYSR QSKEYSDKII SRYGVYEYVL NSQRDAERKL SLFKGVGGDT NELTMNLYNL
SVNDINSANN MFDSAANSTD YTNTMLEYNK SSEKSELGYN VLAIDLRREY LISESVLTNG
DANDTQITNL RDESANLLAS NDYTNSLTKS RDAMSILDRL EAPLEYAKAQ EAMDKAKKDG
YNESKPNMYN EASKSLSSAG ETLIANNYSE SLMHSKNVIS LVNSMGVSGD NNEAVAVTDG
AFPKYYTVQA RKTNTDSLWR IASYDFIYGN GNLWNKIYEA NKDKIKDPSV IRAGQVLTIP
SLKGELREGT YDSNQTYSSI KNFSTNNQRT SETTVNEETA AEEETVGENV AVDEEAVIEE
VVTEEEMTEE TATDEETANE DMAADEELTE EDTITAEERA AVKEGEIVVE DEEEVQEQAE
ETENSVIDEQ IDNTAETENQ
|
|---|
| |