| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bmur_1828 |
|---|
| Symbol | |
|---|
| ID | 9142824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachyspira murdochii DSM 12563 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014150 |
|---|
| Strand | + |
|---|
| Start bp | 2091549 |
|---|
| End bp | 2093381 |
|---|
| Gene Length | 1833 bp |
|---|
| Protein Length | 610 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_003634109 |
|---|
| Protein GI | 296126857 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.00908755 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TTCATTCTAT AAGAGTGAAA ATGCCTATAG CAATTAGTAT TTTAAGTACT
ATATTTTTAG TTTTAATAGT TGTCATATTA TCATACAGAT CTCATATTAC AATTAAAAAT
GCCACATTGA ATGGTTTTAA TAATACAGTT AATGGCTATA AAGATATGCT TGATGTTTGG
CTTGATGATA GCAGGAATTT AATAGAAACT TATTCGGTAT CTCCTATAGT AAGAAATTAC
CTATTAGATA GAAATATAGA TATTCGAAGT ACACTTACAG AGTTTGAAGG TATTAATGAA
TATGTGCTTG ACATAGGTAT TACAGATACT AATGGTATAA TTTTAGATAA TGTTAATAAT
GTAAAAATAG GTGAAAATAT AACAACAGTA AGACCTAATA TTTTAAATAT ATTAAAAAAC
AATAATAATA AAGCCTCTTT TGATGATGGT ATACAAAGAT CAAGTGCTGA TAACAAATGG
TCGCTTGCAG CTATTTCTGG TGTTAATTAT AATGGGGAAT ATATAGGAAA TATATATATG
ATATTAGATT GGGAGGAGCT TTCTGTAAAA CTTCAGGATT TGAAATTACC TGAAAGAACT
AGAATATTTG CCATTGATGA TGAAGAGACT GTTTTACTTG ACACCAAAAA CGAAATTAAT
ACGAAAGCAA ATGAAGCTTA TGGAGAAATT ATAAATAGCG GTTTATCATC AGGTGTTATG
AATTATATAT CTTCCGTAAG TCATGATCCT AGAACAGCAG TTTACAGCAG ACTTCAAAAT
TTATCTTGGT ATTTAATTAT GGCTATGGAC GATAATATTA TATATAAAGA TAATAATGAT
TCTATAAAAA TATCTATTAT TATATGTATT TTATCTATTA TTTTTATAAA TATATTTGCT
TTTATTTATA TTAAAAGAGT TACACACCCT CTAAAAGTAT TAATGAGTCA TGCCACTAGC
ATATCAGAGG GAAATATTAG TATAAATACT AAAAGTACAT ATGCTAAAGA TGAGTTTGGA
GAATTAGAGA GGGTTTTTGA TATTATGAGC AGCAGGTTGG CAGAGGTTGT TTATAATGTT
AATAATGCCT CAAAAGAGAT AATGGAAGCA GCAGAAAATA TGATGGAAAG CAGCAGCGAA
TTATCAGCAA GAACGGACAG TCAGTCATCT AGTTTGGAAG AAACAGCAGC TAGTATTGAG
GAGATGGTTT CTAATATAAA GATTTCAGCT GAGAACTCTA TACATGGTAA GGATATGATG
TCAGAGTCTA TTACATTCAT TGAAGATGCT GCAAACATTA TATCTCAAAC TGCTTCAAAT
ATAGAAGAGG TTTATCAGTC AAGTGAGAAA ATAAAAGATA TTACAAAGAT TATTGAAGAT
ATTGCTTTTC AAACTAATAT ACTTGCACTT AATGCTTCTG TAGAGGCGGC ACGTGCTGGA
GATCATGGTA AAGGTTTTGC TGTTGTTGCT TCTGAGGTAA GAAATCTTGC TCAAACTACT
CAGGCTTCTG TAAAAGATAT CACAGCATTG GTTGATAATA CATCAAGTAA AATAGATATA
GCAACTAATA CCGCTAAACA GTCGCAGGAT ATATTTGCAA AACTTCAAAG CAAAGTATTA
GAAACTTCAA AACTAATGGA AGATATTACT TCAAATGCCC TAGAACAGCA GTCTGGAACT
AATCAAATAA GTACCGAAGT TAATAATATG GAAACTGCCA CTACTCAGAA TGCTGCTTTG
GCTGAAAACT CAAGTGAGAT ATCAAAAAGT TTGGTTGAAA AAGCTAGATT TTTAGAAAGC
AGTATAGAGT TTTTTAAGAT TTCTAATAAT TAG
|
|---|
| Protein sequence | MKKIHSIRVK MPIAISILST IFLVLIVVIL SYRSHITIKN ATLNGFNNTV NGYKDMLDVW
LDDSRNLIET YSVSPIVRNY LLDRNIDIRS TLTEFEGINE YVLDIGITDT NGIILDNVNN
VKIGENITTV RPNILNILKN NNNKASFDDG IQRSSADNKW SLAAISGVNY NGEYIGNIYM
ILDWEELSVK LQDLKLPERT RIFAIDDEET VLLDTKNEIN TKANEAYGEI INSGLSSGVM
NYISSVSHDP RTAVYSRLQN LSWYLIMAMD DNIIYKDNND SIKISIIICI LSIIFINIFA
FIYIKRVTHP LKVLMSHATS ISEGNISINT KSTYAKDEFG ELERVFDIMS SRLAEVVYNV
NNASKEIMEA AENMMESSSE LSARTDSQSS SLEETAASIE EMVSNIKISA ENSIHGKDMM
SESITFIEDA ANIISQTASN IEEVYQSSEK IKDITKIIED IAFQTNILAL NASVEAARAG
DHGKGFAVVA SEVRNLAQTT QASVKDITAL VDNTSSKIDI ATNTAKQSQD IFAKLQSKVL
ETSKLMEDIT SNALEQQSGT NQISTEVNNM ETATTQNAAL AENSSEISKS LVEKARFLES
SIEFFKISNN
|
|---|
| |