| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bmur_1613 |
|---|
| Symbol | |
|---|
| ID | 9142606 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachyspira murdochii DSM 12563 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014150 |
|---|
| Strand | + |
|---|
| Start bp | 1852888 |
|---|
| End bp | 1854801 |
|---|
| Gene Length | 1914 bp |
|---|
| Protein Length | 637 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | |
|---|
| Product | flagellar hook-associated protein FlgK |
|---|
| Protein accession | YP_003633898 |
|---|
| Protein GI | 296126646 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.000000204233 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAACAA GCTCATTTTT TGGTATAGAA TTAGGTAAAA GATCACTTCA GAACTTCAAA
ACAGCATTAG AAGTTACAGG TCATAATATA AATAATGTTG CAACTAAAGG CTACAGCAGA
CAGAGAGTTG TAATGCGTAC TTTTGATAAG CCTTTAGAAG CTCCTAGCCT TAATAGAGCA
GAGCGTGCTG GTCAAATAGG TCAGGGTGCT GAAATCACTA CAGTAGAGAG AATAAGAGAT
CAGTTTATAG ATTCAAAAAT AATGATGGAG CTTGGTACAG ACGGATATTG GAAAACAAAG
TCTGATTATT TAAAGCAGTT AGAGGCTATA TATAATGAAC CGGGCAATGC TAATTTAAGA
AGCGATTTAG ATGCTTTTTG GGATTCTTGG CAGGAAATGG CTGCTAACCC TTCAGAAAGA
GGAACAAGAA TGGTTTTAGT AGAGAGAGCC GACAGGGTAA ATAATTCTAT TAATCAGATG
TTTAATCAAA TGAACGGTAT GCGTAATAAT TTGAATAATC TTGTTGAAAG CAAAATTAAT
AGAATAAACG ATATATCTAA TTCCATTAAA GATTTGAATG TTGAAATAGT AAAACAGCAG
GCACTAGGAC AAAGCCCTAA TGATTTGCTT GACAGAAGAG ACTTGCTTAT AGATGAACTT
TCTTCTCTTG CTAATGTTGA TATAAAATCT ATGGATCCTG ATGAAACTAT TGTTTATATA
GGAGGCAGAG CTTTAATTCA GGGAAATGTT GTAAGCGAAT TAAGTGCTGA AAAAAATATC
AATAATGAAG GAATGTATGA TATATATTGG AAGAAAGATC ATGTTCAGGT GCAGTTTGAA
GGCGGAGAAT TAAAGGCTTT ATTAGAATTA AGAGATGTGG ATACAGTTGA TGCTATTAAT
GATATAGATA CATTTGCTAT GAATTTGGCT GACAGTGTAA ACGAAGTTCA CAGAAGCGGT
TTCGGACTTA ATCAGGAAAC AGGTATTGAT TTCTTTACTA TGACAAAAGC TGCTCCTTCA
GTTATAGGTA ATTTTGACAG CAATAATGAC GGACAGGAAG ATTCTACTAT AATGTTTAAA
GTAAGCGGTA TAAATTCTAT AGATCCTACA GACAGTATAG GAAGCAGCGG AACTTTAATC
TTTGGTAATA AATCAAGAGA AGGTGCTGAT GTTGCAATAG ATTATACAGC CCAAATGAAA
GTAGGCGATT TAATAGATAA AATTAATTCA AGCGAGGCTA ATGTATCTGC TTATTTAGAT
GATAATAACA AACTTGTACT TAAAGCCAGA GCTTTTGATG ATTATATGAG ACCTTCATAT
TTCATTAAGC ATATAGAAGA TTCAGGTGAT TTTCTAGTTG GTATAACAGG GGTATTAAAT
CAGTCGGGAG CTAATGGAGC ATATAATTGG CAGGCTACGG ATCAGGTAAA TCAATTAGCA
GGAGACTTTA GAAACTTTAC TACTACTCCA TACAGACATC CAGCTTCAGC GATTGCTGTT
AATGATATTA TAAGAAATGA TGTAAACTAT ATTGCAGCTT CTAAAGGTAT AGATACAACA
GGAAACGGAT TTAATGATAA ATGGAATGGT TTGGGCGATG GAGCTAATGC TTTAGCTATT
GCTAATTTGA AAAATAAAGA GATAATGGTT GAAAGCAAAT CTACATTTAA CGATTTTTAT
ACTGGAAGTA TTGCGAGAAT TGCCTCAAGA ACAGAGACCG CTAATGCCGA AACAGAAAAG
CAAACTGTTG TTATGGAATA TCTTGAAAGA TTAAGACAGT CAGTGTCTGG TGTTAACTTA
GATGAAGAGG TTGCTCAAAT GGCTATGTAT CAGCATGGTT ATAATGCTTC TGCTAGAGTA
GTTAGTATAA TGGATCAGCT GCTTGATGTT GTTATAAATA GAATGGGTGT GTAA
|
|---|
| Protein sequence | MSTSSFFGIE LGKRSLQNFK TALEVTGHNI NNVATKGYSR QRVVMRTFDK PLEAPSLNRA
ERAGQIGQGA EITTVERIRD QFIDSKIMME LGTDGYWKTK SDYLKQLEAI YNEPGNANLR
SDLDAFWDSW QEMAANPSER GTRMVLVERA DRVNNSINQM FNQMNGMRNN LNNLVESKIN
RINDISNSIK DLNVEIVKQQ ALGQSPNDLL DRRDLLIDEL SSLANVDIKS MDPDETIVYI
GGRALIQGNV VSELSAEKNI NNEGMYDIYW KKDHVQVQFE GGELKALLEL RDVDTVDAIN
DIDTFAMNLA DSVNEVHRSG FGLNQETGID FFTMTKAAPS VIGNFDSNND GQEDSTIMFK
VSGINSIDPT DSIGSSGTLI FGNKSREGAD VAIDYTAQMK VGDLIDKINS SEANVSAYLD
DNNKLVLKAR AFDDYMRPSY FIKHIEDSGD FLVGITGVLN QSGANGAYNW QATDQVNQLA
GDFRNFTTTP YRHPASAIAV NDIIRNDVNY IAASKGIDTT GNGFNDKWNG LGDGANALAI
ANLKNKEIMV ESKSTFNDFY TGSIARIASR TETANAETEK QTVVMEYLER LRQSVSGVNL
DEEVAQMAMY QHGYNASARV VSIMDQLLDV VINRMGV
|
|---|
| |