Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bmur_1284 |
Symbol | |
ID | 9142270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachyspira murdochii DSM 12563 |
Kingdom | Bacteria |
Replicon accession | NC_014150 |
Strand | - |
Start bp | 1489447 |
End bp | 1492500 |
Gene Length | 3054 bp |
Protein Length | 1017 aa |
Translation table | 11 |
GC content | 22% |
IMG OID | |
Product | TPR repeat-containing protein |
Protein accession | YP_003633575 |
Protein GI | 296126323 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00000496728 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTGTT ATAATTTTAT TCATAATATG AAAGCTGATA TTGAGTTTGC ATTTCTTAAA AAATTTAACT TTGAAACTTT TGAAGATAAT ACTTATTTTT ATTATGATTA TATAGATAAG TTAAAAAATA GTGATAAAGG CTTAAATATA AAATATAATA CCGCAGTTTT GCAAAAGATT ATAGATTCTT ATATAGATGA ATGTGCTTAT ACTGGAGATA ATGAGAGCTT TGAAAATGTT ATAGGAAGTC TTAATGCTGT TATGATTAAA GACAGCTTTA ATATATATGC AAGAAATAAA GCAGCATTTT TATACTATAC TAGATATATT TATGATTCTG ATGATATTTA TTATGATATA GCAATGGAGA ATATAAATAA AATACTTCAT TATGAGAATG ATATTACTTA TTTTATTTTG GCTCTTTTAT ATCAATTTAA ATATTTAAAC ACTAAAGATA ATCAATTTTT TAAAAATGCT CTTTATGCAT ACAAAGAAGT AATAAAATCA AACGGTAATG ATATAAATTT AAGCTTCAAT ATTTATCTGT TATATAAAGC CAAATTTCAA AATATAGAAA AAGAAAAATA TTTTGATATA GCAGCAGAAG CATATACTGA AATACTCAAT ATAGATAATG AAAATATATT TGCATTATGC GATTTAGCAA AACTTTATAG AGATAAATTT ATACTTACAA AAAATTCTGA TTATTATTTG AAAGCTGTCA ATTATTATAT GGAAATATCA TATATAAGCA GAGATGTTAA TATTATGCTT AATTTGGGTT TTTTATATAC TTTGATGTTT AAATACAGCA GTGATTTTAA TTTTTATGAA GAGGCTGTTT CATTATATAA ACAAACACAA GAAGCCAAAG AGAATGATAT TATTTTATAT AATTTACTAG GATATTTATA CACAATTAAA TACAGATTTA CAAGAACTAA AATAGATTTT GAACTTGCTT TGAATTATTA TAACAATATA GATAATAATA ATAAGTATTA TTTTATGGGG CATTTGTACT TAATATGCTA TGATTATACA AAAGATAATT TGTATTTCAA TGCTTCTCTC TCTTCATTTA ATCATTTGGA TACAGATGAA ACTGATATAT TAAACTCTTT AGCATATCTT CATGAATGCA AATTTAAAAT TACAAAGCAT AAAGAAGATT TTGATGAGGC TATATATTAT TATAACAGAG CAATAGCAAT AGACAGAGAT TATTTATATA CATATATTAA TAGATTTGAA CTTTACAGAC TGGCATTTCA TTATTTTGAT GACAGCAATT ATTTTAATTT GATTATTAAT GATTATGAGA CTTTATTTAA TGAGGGAGAG CTTAATAATG ATAAAATGCT TGCATACTAT ATTAATCATA ATATAGGCTC TTTTTATTAT AATCTATATG CTGAATGTTT GGAAGATAAA AATATATGTG CTAAATATAA TTTTAAAGAT GAGTTTTTTA ATAAGGCTTT AGTATTTTTT GAATCTTCAA AATCATTTAT TGCTATAAGT GATTTATACA GGCTTAAATA TATAGATGAA CATAATGACG ACAGATATTT TGATTTGGCA TTGTCATATG TTGATAAGAA TGCTGATTTA TTTAGATATG ATATACATAA TTTTTTACAG AGAGCTATAA TTTATTATGA GAAATACAAA ATATCAAATG ACATAAAATA TTTTGAAAGT TCTTTGGAAT ATTTTGATTA TGCTTATGAT ATAAATAAAT ACGATAAGAC TTTATATTAT AATTCGGCAC TTCTTTATCA TTATAGAATT ACAGAAAGCA GATTTGAAGA TTATAAGGAG GCTGAAAAGA ATTATCTTAA AGCTATAGAG TTAGACAGCT CATATTTAAA GGCTATTGAG AATTTAGCAT TTTTATATTA TATAGTATAT AGTGTTTATA ATGTTAATGG AATATTCAAT AATTCTTTGA CTTGTTTTGA AAATGTTCTT CTATATAATG AAACTTCATT AATAGCTTTA GAAGGTATTG GCGATTTATA CAGCTTAAAA ATTACAAATA ATAATTTAGA TAATATAACT AAATATGAAT ATATATTAAA AAGTATAGAA TATTATGAAA GAGCTTTGTC TCTTGGTATA GGAATTGATA CTATTTATAA AAAATTAGAG AGTATGTATT TTATATTATT TAATGAATAT GGAGATACTG CTTTTATAGA TGATTATTTT GATAAATATA ATTCTCTTTT ACCTGTAAAC AGAAGTTTGG CTAATAAGCA TTTATTTATA CTCAATAATG TTATGTATGA TATTTATAAA CAAAATAAAT ATTTAATTAA AGCAGGAAAA TGTTTAAGCA GTTTAGAGAC TGATATATTT TCTATAAGGC TATGCATAGA GTTTTTTAGA TATTTATTTT ATGTTACAAA AAATACTAGA TATGCTTTGC TTACTTTATT TTATTTGGAG TATATATCAG GTATTGAAAG AAGCAATATA GATTATTATT TTGAGATTGG GCTTCTTTAC TACAAAGTAT ATTTAAAAAC TAAAAACTAC GAATATATTA TACATTCTTT TCACTCTTTC AGCAGAGTTT TGGATATTAA TAAAGTGTAT CCTGAATGCA ATTATTATAA GGCTCTTATA TTAAAGCATT TATATGATAA GACTTTGAAA ATAGATTATA TAGAAAATGC ATTTGATAAT TTAAATCAGT CTGTAAAGCT TAGAAATATA AAAGCATATA GTTTGATAGG AGATATTTAT TTAAGTATGT ATAAAAAATA TAAAAGAGAT GAAGAGTATT TAGATAAAGC AATTAACAAT TATAATTTGT CTCTAGAAAA TAAATACTAT GGAAAAAATG AATATGAGGT TTACTTTTCT TTGGGGATTT GCTATTATCT AAAATATAAA GAGCATAAGA ATATTGAAGA GTATTATGAT AATTCATTTG AGTATTACAA AAAAGCATTG AACATAAATA ATAAAAGCAT AAAAATAAAA AGATTTATCA AATATCTTCA GATAATAAAA AGACTTCCTC CTTCCGCATT TTAA
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Protein sequence | MNCYNFIHNM KADIEFAFLK KFNFETFEDN TYFYYDYIDK LKNSDKGLNI KYNTAVLQKI IDSYIDECAY TGDNESFENV IGSLNAVMIK DSFNIYARNK AAFLYYTRYI YDSDDIYYDI AMENINKILH YENDITYFIL ALLYQFKYLN TKDNQFFKNA LYAYKEVIKS NGNDINLSFN IYLLYKAKFQ NIEKEKYFDI AAEAYTEILN IDNENIFALC DLAKLYRDKF ILTKNSDYYL KAVNYYMEIS YISRDVNIML NLGFLYTLMF KYSSDFNFYE EAVSLYKQTQ EAKENDIILY NLLGYLYTIK YRFTRTKIDF ELALNYYNNI DNNNKYYFMG HLYLICYDYT KDNLYFNASL SSFNHLDTDE TDILNSLAYL HECKFKITKH KEDFDEAIYY YNRAIAIDRD YLYTYINRFE LYRLAFHYFD DSNYFNLIIN DYETLFNEGE LNNDKMLAYY INHNIGSFYY NLYAECLEDK NICAKYNFKD EFFNKALVFF ESSKSFIAIS DLYRLKYIDE HNDDRYFDLA LSYVDKNADL FRYDIHNFLQ RAIIYYEKYK ISNDIKYFES SLEYFDYAYD INKYDKTLYY NSALLYHYRI TESRFEDYKE AEKNYLKAIE LDSSYLKAIE NLAFLYYIVY SVYNVNGIFN NSLTCFENVL LYNETSLIAL EGIGDLYSLK ITNNNLDNIT KYEYILKSIE YYERALSLGI GIDTIYKKLE SMYFILFNEY GDTAFIDDYF DKYNSLLPVN RSLANKHLFI LNNVMYDIYK QNKYLIKAGK CLSSLETDIF SIRLCIEFFR YLFYVTKNTR YALLTLFYLE YISGIERSNI DYYFEIGLLY YKVYLKTKNY EYIIHSFHSF SRVLDINKVY PECNYYKALI LKHLYDKTLK IDYIENAFDN LNQSVKLRNI KAYSLIGDIY LSMYKKYKRD EEYLDKAINN YNLSLENKYY GKNEYEVYFS LGICYYLKYK EHKNIEEYYD NSFEYYKKAL NINNKSIKIK RFIKYLQIIK RLPPSAF
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