Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bmur_1234 |
Symbol | |
ID | 9142219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachyspira murdochii DSM 12563 |
Kingdom | Bacteria |
Replicon accession | NC_014150 |
Strand | + |
Start bp | 1434290 |
End bp | 1437064 |
Gene Length | 2775 bp |
Protein Length | 924 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | |
Product | trep |
Protein accession | YP_003633527 |
Protein GI | 296126275 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000000941039 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAGT ATATTTTATT TCTTACTTTA ATATTTACTA TAAGTGTAAA TCTATACACA CAGGTTTTCA AACCATTCAG AAAGTTATAT ACCATACAAA CAGAAAAGTT TGAAATTATC TTTCCTATAG AATCCAGAAG AACAGCTGAA AACCTTGCAA AAGTTGCTGA TGATATATAC GAAAAATATT CTAAAATTTT AAACAGTACA GTACGAGGAA AAATCCCCAT AACAATAACC CCCGATTTTA ATCTGTTTAA TTCGGCAGCA ATGATAATAC CTGCTTCAAG CCTTATACTT TATGATACCA ATCTGGACGA AAATTTTACA AGTTTCAGTA ATAACTTTGA AACAGTATTT ATACATGAAC TTACTCATCT GCTGACTATG GCTTCAGAAA ATACAGGGCT TGCAACTAAG GTAATGGGAA ACTGGGCTTC TTTTGTTCAT ATTAACGCAA TGCCTTTTAT GATAGAGGGT GCTCCTGTTA GTATGGAAAG TTTTACAGGT TTTGGCAGGG CTAATGATCC GCTTGTTAAA GAGAGATTGA GACAGGATAT TTTTGAAGGA AATTTCAGGA CTCCAATTCA AGCCTCCTAT GTATGGACAA AAATGCCATA CGGAAATGTA TACTATGAAT ACGGCGGATT ATTTTCAAAA TATTTGCAAG ACAGATTCGG AATGGAAAAG TATAATGAGT TTTGGAATAG AATGCAGACA AGACTTCATT TTTCATTTTT GGTTTATAAT TCTGGAGTAT ACGGAGCTTT TAAAAAAGTT TACGGAATAA AATTTACTGA AGTATGGTCA GACTTTCAAA ACTATTTGGT GCTTACAGAT ATTAATCCAA GCGAAGAATT GAGAGTAAAT GATAAAGAAA CTTTTATTAA TGATATCGCC TCATACAATG ACACTCTATA CTATATAGAC GGAGATATAG GAGCATTGTA TTCATATAAA GAAAAAAGAA ATAATGAAAA TAATAAAAAA GATTTGAAAT TAGAGTTTTT AATAGACAGA AGCTCTGAAA GTTTGGATAT ATCAAAAGAC GGAAGCAATG CTTTGATAGT GTCATATATG TTTAACGGAG GACTTTATAA ATATATTGTA AAAGAATATG ATTTAAATAA AAAAAGAAGA ACAAAAAGAA AATGGTTTGA CCTGCAGTAT GCAAGATATT TTAAAAATGG TATTATAGGA ATATCAAAGG ATTTGCATAA CTCTGTTTTA GTATACATAA ATGAGAATAA TGAAAAAGAA ATTTTATTAC AAGCCAATGA TAATTTCGGA TACAGTTCTC CTACAGTTAT TGATGATAAT AATATAGCAT TAATAGTTAC AGATAACGGA ATAAAACATA TAGCAATATT TAATTATAAT AGTAAAACAT TAAAATATAT TGATACAAAG GATAACACTT TTAATTATGT ACGTTATTTA AAATACTCAA ATAACAAACT TCTTTTTTCG TATAATAATA ATGACAGATT TTATAAGCTA GGCGAAATTA ATTTAAATAA TAATAGTATT AAGCTATACA CAAAAGACTA TTCAGGCGGG GTATTTTCTG CTGTATATGC TGGAGAGAGC ATTTATTATA AAGGCAGATT TTCAGAGTTT GACAGGCTTA TGAAGTACAC AGACAATTCA TCTCAAACAA AAAACTTCGC ATATACTGAT AAAACAATTA ATAAATACGA GTTTACTCCT CAAATGGATA TGGGAAATTA TAATGCATTT AAATATTTTA AGCCTTGGAC TATGTGGGTG CCTCTTCCTC AAGTAAATGA TACTTTTCCT TTTCTTGTAA ACGGGCTTGG AATATTATCT GTAATCTCTT CACCTTCTGC AAATAATTTG GCGTTAATAT GGCTTGGGTA CGATATACCT TCCAACTTTC TTCAAACTGA ACTCACTGTT ACTTCTTTTA GCATGCTTTA TCCTTTATAC TTTGGGTTTA AAAGCGATGT AGTATATTCT ACATACAATT ATTGGAGATT AAATACATAC CTTGCTATGC AGTTTTTAAT TAATACAGAA AGCGACAAAG TGCATTTCTT ATTAGAGCCT TCGATATCTG GTGCTTTATT TTCAGAATTT GTCAATCCTC AAACTAATAC ATCATCAGCA TTTACATGGA AATATTCTTC ATATACTTTT AATATTTCTC TAAAGGCATC AATGATATTC AGAGTGCAAA CTGATAAACC ATACAGAGAT GATTTAGTTG ATATAACTAT ATACCCTACA TACTCTATAA GATATAATAA ATTTGCTATA GACTTTAATA CAAAATTCCA AACAAGATAT GTTCCTATAA GAGCAAGTTT TTACGGTTCT TATGCATTCG ATACAAATAC AGCATTTGAT GGAAACTCTG CAGTATTCGG AGCTAGAGAA GTAAAAGCTC CGGAAGAGTT TTATTCATAT GTACAAAATA AAAAATATAA ATCAAATTAT TTTTTAGGCG GTGATGTTGA ACTTTTAGGT TATTTAAGTT CTCATTTTAA TTTAAGCCAT ATATACTTTG ATAATTTCTT TGCTTCGCTT TCATATAGAT TTGCTTATTA CTCAAAAGAA TATATGCATT CTGCGGCTTT AAAAGCAGGA TTTGATGCGA GCATTCCTGT ATCAGGATAT CAGAATATTG TTACAGGTGA GCCTTATTTA CTTTTAGCTT TAAGACTTCC TAAGAGCCTT GATAAAAGTA TAATTCAAAA CTACCCTACT CTGAATGATA TATATATAGG CTTTGGCTTT CAGATGTCTT GGTAA
|
Protein sequence | MKKYILFLTL IFTISVNLYT QVFKPFRKLY TIQTEKFEII FPIESRRTAE NLAKVADDIY EKYSKILNST VRGKIPITIT PDFNLFNSAA MIIPASSLIL YDTNLDENFT SFSNNFETVF IHELTHLLTM ASENTGLATK VMGNWASFVH INAMPFMIEG APVSMESFTG FGRANDPLVK ERLRQDIFEG NFRTPIQASY VWTKMPYGNV YYEYGGLFSK YLQDRFGMEK YNEFWNRMQT RLHFSFLVYN SGVYGAFKKV YGIKFTEVWS DFQNYLVLTD INPSEELRVN DKETFINDIA SYNDTLYYID GDIGALYSYK EKRNNENNKK DLKLEFLIDR SSESLDISKD GSNALIVSYM FNGGLYKYIV KEYDLNKKRR TKRKWFDLQY ARYFKNGIIG ISKDLHNSVL VYINENNEKE ILLQANDNFG YSSPTVIDDN NIALIVTDNG IKHIAIFNYN SKTLKYIDTK DNTFNYVRYL KYSNNKLLFS YNNNDRFYKL GEINLNNNSI KLYTKDYSGG VFSAVYAGES IYYKGRFSEF DRLMKYTDNS SQTKNFAYTD KTINKYEFTP QMDMGNYNAF KYFKPWTMWV PLPQVNDTFP FLVNGLGILS VISSPSANNL ALIWLGYDIP SNFLQTELTV TSFSMLYPLY FGFKSDVVYS TYNYWRLNTY LAMQFLINTE SDKVHFLLEP SISGALFSEF VNPQTNTSSA FTWKYSSYTF NISLKASMIF RVQTDKPYRD DLVDITIYPT YSIRYNKFAI DFNTKFQTRY VPIRASFYGS YAFDTNTAFD GNSAVFGARE VKAPEEFYSY VQNKKYKSNY FLGGDVELLG YLSSHFNLSH IYFDNFFASL SYRFAYYSKE YMHSAALKAG FDASIPVSGY QNIVTGEPYL LLALRLPKSL DKSIIQNYPT LNDIYIGFGF QMSW
|
| |