| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bmur_1088 |
|---|
| Symbol | |
|---|
| ID | 9142073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachyspira murdochii DSM 12563 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014150 |
|---|
| Strand | + |
|---|
| Start bp | 1280616 |
|---|
| End bp | 1281860 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_003633382 |
|---|
| Protein GI | 296126130 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.00683834 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TATTATTTTT ATCTGCTGTT ATTCTTATAT CAGCATTTCT CGCTATTTCC
TGCAGAGGTC AAAAAAGCTC TGAAGAAAGC TCAATAACAG TAATGGTTCC AGACTGGGCA
GTACCTTCTG ATGAAATGCT CAATGCGTTT AAAGAAGAAA CTGGAATAAC TGTTAATATG
AATATTATAG CATGGGAAAA TATAAGAGAT AAAATATCAA TAGCAGCGGC TGGAGGAACT
GCTGCTGCGG ATGTTGTGGA AGTAGACTGG TCTTGGGTAG GAGAATTTAA TAGTGCAGAT
TGGCTTGAAC CTATAGAATT AAGCCAAGAA GAAATTAACG CTATGCCTTC TATACAGCCT
TTTATAATAG ACGGTAAAGT TTTAGCTCTT CCTTATGCTA ATGATTTCCG TTTAGCTTAT
TACAATAAAA AACATTTTGA AGAAGCAGGC ATTACTGAAG TTCCAAAATC TTGGGACGAT
GTTTATAATG CTTTAATAGC TATAAAAAAT GCAGGTGTAA CAAAATATCC TTTTTCTATG
CCTTTAAATG CTGATGAATC TTGTACTACT TCATTAATAT GGATGGCTTA TTCAAAATAT
GGAATAGTAT TTAATGAAGA CGGAACTTTA AATAAAGATG CTGTACTTGG AGCATTAGAG
TTTATAAACA GAATGGCTAA TGTTGATAAT TTGATTGATC CTGCTTGTAA AACTTCTACA
GGTATGGATG CTTATAGAAG AATTAATTCT GGAGAGGCTA GTTTTATAGT AGGTCCTACT
TCTTTTGTAA GCAGAGTGCA AGATCCTAAT GAATCTAAAG TGGTAGGAGA TGTTATACCT
ATACTTCTTC CGGGTGCTGA TGGACCTTCC ACAAAAACTT TTGCTTTGCC TGAAGGTGTA
GGAGTAATAA AATTATCAAA AAACAAAGAA GCTGCAATGA AGTTTGTAAA ATGGTTTAAT
TCTCCGGAAA TACAAAAACA ATTAAACTAT GTACAAAATA CTATGCCTAC AAGAACTTCA
GTTATGGAAG AACTTATTAA TGAAGGCAAA TTAAAAAATA CTGGTGCTTT ACTTGAAGAA
TCTACTTTAA TATCAAGCCC ATTCCCAAAA GGTGTTCCTA GTTATTATTC TGAAATGACT
ACTGCTATAT TTAATGCTGT TAATGAAATG GTTTTAGGTG CAAAAACTCC AGAAGAAGCA
TTTAATGCTA TGGATACTAA AATAAAAGAA TTAGTTTCAA GATAA
|
|---|
| Protein sequence | MKKILFLSAV ILISAFLAIS CRGQKSSEES SITVMVPDWA VPSDEMLNAF KEETGITVNM
NIIAWENIRD KISIAAAGGT AAADVVEVDW SWVGEFNSAD WLEPIELSQE EINAMPSIQP
FIIDGKVLAL PYANDFRLAY YNKKHFEEAG ITEVPKSWDD VYNALIAIKN AGVTKYPFSM
PLNADESCTT SLIWMAYSKY GIVFNEDGTL NKDAVLGALE FINRMANVDN LIDPACKTST
GMDAYRRINS GEASFIVGPT SFVSRVQDPN ESKVVGDVIP ILLPGADGPS TKTFALPEGV
GVIKLSKNKE AAMKFVKWFN SPEIQKQLNY VQNTMPTRTS VMEELINEGK LKNTGALLEE
STLISSPFPK GVPSYYSEMT TAIFNAVNEM VLGAKTPEEA FNAMDTKIKE LVSR
|
|---|
| |