Gene Bmur_0799 details

Gene Information

• Locus tag: Bmur_0799
• ID: 9141779
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Brachyspira murdochii DSM 12563
• Kingdom: Bacteria
• Replicon accession: NC_014150
• Strand: +
• Start bp: 950833
• End bp: 952806
• Gene Length: 1974 bp
• Protein Length: 657 aa
• Translation table: 11
• GC content: 33%
• Product: TRAP transporter, 4TM/12TM fusion protein
• Protein accession: YP_003633097
• Protein GI: 296125845

Plasmid Coverage information

• Num covering plasmid clones: 39
• Plasmid unclonability p-value: 0.897954
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACATA AAAATGAAAT TCATATGATA ACAGCTGAAG AAATAGATGA TTATATGAGT 
AAATATGACA GTGAATCAAG ATACAGAAGA TATAATGATT GGAAAAAATA TTTAATCATA 
GTAATATCGG TAATATTCTG CTTGTTTCAA TTATATTCAA TACTTTCTGG AAGAATTACA 
GCACAAGTTG TAAGAGCTAC ACACTTGGCA TTTGTTATGC TTTTAGCATA TTTACTTTTC 
CCTATGAAAA AAGATATGCC TAAAGACAAA CTTCCATGGT ATGATGTAAT ACTTGCCGTT 
ATAGGTGCTG CTTCTTGGAG CTATATTACT ATAAATTTTG AATCTCTTGT AAGACGTGCA 
GGCATATATA CATCAACAGA CATTATAATA GGTATAATAG GTATACTTCT TGTATTTGAA 
GCGTGCAGAA GAATAGTAGG TCTTCCTATA CTTATAATAT CAATAGTTTT TATTATATAT 
GCATTATTCG GAGCTTATGC ACCGGGTTTT TTAAATCACA GAGGATACTC TCTTCAAAGA 
TTAGTTTCAC ACTTATTTTA TAATACAGAA GGTATAATGG GTACGCCTAT AGGAGCATCA 
GCTACATTTA TTTTCTTATT TATATTCTTT GGAGCATTAC TTGATAAAAC TGGAATAGGG 
CAGTTTTTTA TAGATATATG TAATGCCATA GCAGGAGGTT TTGACGGAGG TCCTGCAAAA 
GTAGCTGTAC TTACAAGTGC TATGTTTGGT ACTGTTTCTG GAAGTTCTGT TTCTAATACC 
GTAGGTACTG GGAGTTTTAC AATACCTATG ATGAAATCTT TAGGATATAG GCCTGAGTTT 
GCGGGTGCTG TTGAGGCTTC TGCTTCTACA GGAGGACAAT TAATGCCTCC TATAATGGGT 
GCTGCTTCTT TTCTTATGGC TGAAAGTTTG GGCATACCTT ATATGGAAGT TGCTAAAGCG 
GCTATTATTC CAGCTATTTT ATATTTTACT GGTATATTTA TAATGGTACA TTTAGAGGCT 
AAAAAAACAG GGCTTAAAGG TTTATCAAGA GATTCTCTTC CTAAAATAGG AGAGCTTTTG 
ATGAAAAAAG GATATTTAGT TATTCCGCTT CTTACTATAA TATATTTCTT TGTGCTTGGT 
AAAACTGCTA TATATGCTGG TTTAATGGGT ATTATTGCTG CTGCTATAGT TGCTTTAGTT 
AATTCTATAG TAGACATCAT AATGAAAAGA AAAGTAAGTT TTGGGCTTAA TGATTTAATA 
GACGTTTTTG TTAATGCTGC TAGAAATATT ATAAGTGTTG CTATCGCATG TGCTATGGCT 
GGTATTATAA TAGGAGTTAT TACTTTAACA GGTTTAGGAT TAAAAATAGG AGCAGGCTTA 
ATATCAATAT CCGGAGGAAT ACCTATACTT TTATTGTTCC TAACTATGAT TAGCTCAATA 
ATACTTGGTA TGGGAGTTCC TACTACTGCC AATTATCTTA TCACTTCTAC AATAGCGGCA 
AGTGCAATAA TAGGTTTAGG TTATGAACCT TTAGCTGCAC ATATGTTTGT ATTTTATTTT 
GGTATTATAG CAGATGTTAC TCCTCCTGTT GCTTTGGCTG CTATGGCTGG TGCTGCTATC 
GCTAAATCAG ATCCTCTTAA AACTGGAATA GAAGCAACAA AACTTTCAAT AGGTGCATTT 
ATTATTCCTT ATATGTTTAT ATTTAATCCA GACATATTAA TGATTAATAC TACCATATCT 
GATATTATAC CTATACTTAT AACTTCGCTT ATAGGTATGT TTGGAGTGTC TGCAGGATTA 
GAAGGTTATG TATTTAGAAA ATGCAAACCT TATGAGAGAA TATTATTTAT CATAGCAGGG 
CTTCTTTCTA TATACCCTGA AGTTTACAGC GATATTATAG GAATAGGAGT TATAGCTATA 
CTAGTGATTA TACAAATCAT TACAAAAAGG AAAAATCAAG CTGCAGCTGC TTAA 

 

Protein sequence

MKHKNEIHMI TAEEIDDYMS KYDSESRYRR YNDWKKYLII VISVIFCLFQ LYSILSGRIT 
AQVVRATHLA FVMLLAYLLF PMKKDMPKDK LPWYDVILAV IGAASWSYIT INFESLVRRA 
GIYTSTDIII GIIGILLVFE ACRRIVGLPI LIISIVFIIY ALFGAYAPGF LNHRGYSLQR 
LVSHLFYNTE GIMGTPIGAS ATFIFLFIFF GALLDKTGIG QFFIDICNAI AGGFDGGPAK 
VAVLTSAMFG TVSGSSVSNT VGTGSFTIPM MKSLGYRPEF AGAVEASAST GGQLMPPIMG 
AASFLMAESL GIPYMEVAKA AIIPAILYFT GIFIMVHLEA KKTGLKGLSR DSLPKIGELL 
MKKGYLVIPL LTIIYFFVLG KTAIYAGLMG IIAAAIVALV NSIVDIIMKR KVSFGLNDLI 
DVFVNAARNI ISVAIACAMA GIIIGVITLT GLGLKIGAGL ISISGGIPIL LLFLTMISSI 
ILGMGVPTTA NYLITSTIAA SAIIGLGYEP LAAHMFVFYF GIIADVTPPV ALAAMAGAAI 
AKSDPLKTGI EATKLSIGAF IIPYMFIFNP DILMINTTIS DIIPILITSL IGMFGVSAGL 
EGYVFRKCKP YERILFIIAG LLSIYPEVYS DIIGIGVIAI LVIIQIITKR KNQAAAA