| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bmur_0620 |
|---|
| Symbol | |
|---|
| ID | 9141595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachyspira murdochii DSM 12563 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014150 |
|---|
| Strand | - |
|---|
| Start bp | 745783 |
|---|
| End bp | 749517 |
|---|
| Gene Length | 3735 bp |
|---|
| Protein Length | 1244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | |
|---|
| Product | transcription-repair coupling factor |
|---|
| Protein accession | YP_003632920 |
|---|
| Protein GI | 296125668 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACAGCG GCGAGATCAT ATCAGATATA TTAATAGAAA GATTTACTAG AAGCGAAGAG
TATTTAAATT TTGATATAGA AAATATAAAA AGTATTACAG GGCTTAAAGG AGGAAGCGAT
GCATTACTAT TTGCATCACT TTTTAAGAAA AACAGTATTT TAATAATAAA AGAAAATGAA
AGCGAGGCAA TGCTCCTAAG CCAGTCATTA AACTTTTATA ATATACCTAA TTATTATTTT
CCGGATTATG ATACAGTGCC TTTTACAAAA ATGTCTCCTA TAACCGATAT AGCTCAGGAG
AGAATAAATA TTTTATACAG ATTAATAAAT AAAGAACATT GTATTATAAT AACAACCATA
AACGCCATAA CTAGAAAAAT AGCAAACAGA GAAGACCTTA AAAAACTTTA TATAGAGCTT
CATATAGGCG ATAAACTAGA TTTAGATAAT TTAAGATTAA AATTATATGA TTTAGGATAT
GTTATAGAAA GAGAAGTTGC TGAAAAAGGT ACGGCATCTG TAAGAGGAAG TATTGTAGAT
ATATTTTCTG TAGAATATGA TAATCCTATA AGAATAGAAA TGTTTGATGA TGAGATTGAA
AGTATAAGGT TATTTAATAT AGAAGACGGA AGATCATTTA AAAGTATTGA CAATATAATA
ATTTATCCAG TACGTGAAGT TGTTTACAGC GATGAGGACG TAGAAGTTTT TTTAAATAAA
AATAGTACAG AGAAAGAAAT TAAAGATAAT ATAATTAAGA GAAAATATTT TGCTGGAAGT
GAAAATCTTC TTCCAATGTT TTATTCAAAT TTAGAGACTA TATTTGATTA TTTTGATTAC
GGGTATGTAT TTATAGATGA TGCTCTAAAA TTAAAAACAA AATTAATAAC AATACTTGAC
ACTATAAGAG AAAATTTCAA TGATATAGAT AATATGTTTT CTCTAATAGG AGATATTGAA
AAACTATATA TTAACAATGA TTATTTTAAT GAAATAGTAA AAAAATCAAT TAATATATCT
CCTTTTATAA CTGACATTGA TATATACAAA TTTAATTTTT TAGAAGGCGT TTCTTTCAAA
TCAAGATTGA CAGACTTTCT TGATTATGTT AAAGAATACA GAAAAAAAGA TTATTTAATA
ATTCTCTCTA CTGGTCATTA TGATCAGGCT TTAAGATTCT ATAAAATAAT GCAGGATTTG
TCGCCCATAA TTATAGCACC AGAGGAAGAA AAAAATACTA AGGAAAATTT TAAAGAAGAT
TTTAATAAAA AAGAAAATGA TAATAATAAA GAAGAAATAA AAAATACTGA AGAAGAAAAT
CATAAAGAGA TAATTTTAGA AGATAAAAAT GATATATCAG AAGAAAACAT ATCAGAAGAA
AAAGAAGACT ATTCAAAAAA TGAAAATAAT TTTTATATTA TAACAGCTCA AGCTTCTTCA
GGATTTATAA AAGACGGCAT AAAAACGATA TTTATAGCAG ACTGGGAAGT ATTTGGAAGA
AAAAGAAAAA AGGTAAGAAA GATACCTAAA GTAAATAAAA ATCTAATAGA AACATTTGTT
GATTTGAATG TAGGCGATTA TGCTGTGCAT GTAAATTATG GTATAGGAAA GTATTTAGGA
TTAACAAGAA AATTATCCAA CGGAAAAGAA AAAGACTATA TAACTTTAGA ATATGCTAAG
GGTGATAAAT TATATATACC TGTTGAGCAG ATGAACTTTG TACAGAAATA TATATCTGGT
CATGGAGAAG CTCCTAAATT AACTCAGCTT GGAGGAAGTG CTTGGGATAA GATAAAGAGT
AAGGCAAGAG AAGACGCACT AGCTACTGCA AGAGAATTGA TAAAACTTTA TGCCATAAGA
TCTAATATAC ATGGAAATGT TTATGGTGCT GATACTCAGT GGCAGGACGA TTTTGAAGCT
TCATTCAAAT ATGAAGAAAC CGCCGATCAA TTAAGGGCTA TAAATGATAT AAAAGAAGAT
ATGGAAAGCG GCAAGATGAT GGATAGGCTT GTATGCGGAG ATGTGGGATT TGGTAAAACA
GAGGTGGCAT TCAGAGCGGT ATTTAAAGCT ATAATGGCTG GTAAACAATG TGCCATACTA
TGTCCTACTA CTATACTTTC ACAGCAGCAT TATAACAATG CCAAAAAAAG GTTTGAAGAT
TTTCCTATAC GTATAGAAGT TTTAAACAGA TTTGTTACAA GCAAACAGGC TAAAAGAAAT
AAAGAATTAT TAAAAAATGG TTCCTGTGAT TTGGTAGTAG GCACTCATAT GCTTTTATCT
AATGATATAG AGTTTAAAAA TCTAGGACTT ATAGTTATAG ATGAAGAGCA GCGTTTCGGA
GTTAAGCATA AAGAGGCTTT AAAAAGATTA AGATTAGAAA CAGATGTTCT CACACTTTCA
GCTACTCCTA TACCTAGAAC ATTAAATATG GCTTTAACTG GAATAAGAGA TATAAGTATT
ATTGAAACTC CTCCTCTAAA CAGAATACCA GTAAAAACTT TTGTAACAGA GTTCAGCGAA
GAGGCAGTTG TAAATGCAAT AGAAAGAGAA CTTAAAAGAG ATGGTCAGGT ATTTTATCTA
TATAACAGAA TAGATACTAT AGAATCATTC GCATTGATGA TAAAAAAACT ATGTCCTAAA
GCACGTATAT GCGTAGCACA TGGAAGAATG ACAGGGCATC AGTTAGAAAA AATAATGGAA
GATTTTATTA ATCATAAATA TGATATTTTA GTTTCAACTA CAATAATAGA AAACGGAATA
GATATACCAA ATGCCAATAC TATATTAATA GATAATGCCA ATAGATTAGG TTTGTCAGAG
CTTTATCAGT TAAGGGGACG TGTAGGAAGA AGCGACAGAG AGGCTTATGC TTATATGTTT
TATCCTAGTG ATTTGGCATT AACAGAAGTT GCTTATAAAA GATTGGAAGC TATATCAGAA
CATACAGATT TAGGAGCTGG TTTTAAAATA GCTATGCGTG ATTTAGAAAT TAGAGGTGCA
GGCAACATAT TAGGAAAGGA GCAGTCTGGA ATGATATATC AGGTTGGTTA TGAACTTTAT
ACTCAAATGC TTGAAGAGGC TACAAATGAA TATAAGGGTG AAATAAAAGA AGTTACATTT
GATACAGTAA TAGATTTAAA GCATAATCTA TTTATACCGG ATTGCTATAT ATCTGATTCA
AAAGAAAAAA TATCAGCATA CAAACTTATA ATGCGTTCTC AGGATAATGA AGATATTGAC
CATGCTAAAG ATTATATGAT TGATAAATAC GGCAAACTGC CGAAAGAATT AGAAGATATT
TTTGATATAG CAAGACTTAA AGTAATATTA AAAAGAATAA GAGTATTATC AGTAATGGAA
GGTCAGTATA ATATATATTT GAAACTTGAT AAATATTCTA AAATAGATAC TAATAAACTT
ATAAATCTTA TAAATACTAA AAATTCCGGA GTTTATTTTG ATAAAGATAA TCTAAATCAA
TTAATAATAC CAGTTATACA TGAAAAAGAA AACGATCTTG ATTGGAAAAT AGAAAAAATT
AAAAATACTA TACTTGAAAT AGAAAGTGAT AAAATTAATG AAATAGAAAA TAATGAAGGT
ATAAAAAATG AAAATAATCA AAATAATATG AGTATTACAG AAGCTAATTT CAAAAATAAT
AAAAGCAGTA AAAAAGGAAC TTATATTAGA AGAAGTAAAT CTCCTAAAGT AATAAGAATA
AATAAAGATA AATAA
|
|---|
| Protein sequence | MYSGEIISDI LIERFTRSEE YLNFDIENIK SITGLKGGSD ALLFASLFKK NSILIIKENE
SEAMLLSQSL NFYNIPNYYF PDYDTVPFTK MSPITDIAQE RINILYRLIN KEHCIIITTI
NAITRKIANR EDLKKLYIEL HIGDKLDLDN LRLKLYDLGY VIEREVAEKG TASVRGSIVD
IFSVEYDNPI RIEMFDDEIE SIRLFNIEDG RSFKSIDNII IYPVREVVYS DEDVEVFLNK
NSTEKEIKDN IIKRKYFAGS ENLLPMFYSN LETIFDYFDY GYVFIDDALK LKTKLITILD
TIRENFNDID NMFSLIGDIE KLYINNDYFN EIVKKSINIS PFITDIDIYK FNFLEGVSFK
SRLTDFLDYV KEYRKKDYLI ILSTGHYDQA LRFYKIMQDL SPIIIAPEEE KNTKENFKED
FNKKENDNNK EEIKNTEEEN HKEIILEDKN DISEENISEE KEDYSKNENN FYIITAQASS
GFIKDGIKTI FIADWEVFGR KRKKVRKIPK VNKNLIETFV DLNVGDYAVH VNYGIGKYLG
LTRKLSNGKE KDYITLEYAK GDKLYIPVEQ MNFVQKYISG HGEAPKLTQL GGSAWDKIKS
KAREDALATA RELIKLYAIR SNIHGNVYGA DTQWQDDFEA SFKYEETADQ LRAINDIKED
MESGKMMDRL VCGDVGFGKT EVAFRAVFKA IMAGKQCAIL CPTTILSQQH YNNAKKRFED
FPIRIEVLNR FVTSKQAKRN KELLKNGSCD LVVGTHMLLS NDIEFKNLGL IVIDEEQRFG
VKHKEALKRL RLETDVLTLS ATPIPRTLNM ALTGIRDISI IETPPLNRIP VKTFVTEFSE
EAVVNAIERE LKRDGQVFYL YNRIDTIESF ALMIKKLCPK ARICVAHGRM TGHQLEKIME
DFINHKYDIL VSTTIIENGI DIPNANTILI DNANRLGLSE LYQLRGRVGR SDREAYAYMF
YPSDLALTEV AYKRLEAISE HTDLGAGFKI AMRDLEIRGA GNILGKEQSG MIYQVGYELY
TQMLEEATNE YKGEIKEVTF DTVIDLKHNL FIPDCYISDS KEKISAYKLI MRSQDNEDID
HAKDYMIDKY GKLPKELEDI FDIARLKVIL KRIRVLSVME GQYNIYLKLD KYSKIDTNKL
INLINTKNSG VYFDKDNLNQ LIIPVIHEKE NDLDWKIEKI KNTILEIESD KINEIENNEG
IKNENNQNNM SITEANFKNN KSSKKGTYIR RSKSPKVIRI NKDK
|
|---|
| |