| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bmur_0251 |
|---|
| Symbol | |
|---|
| ID | 9141224 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachyspira murdochii DSM 12563 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014150 |
|---|
| Strand | + |
|---|
| Start bp | 331791 |
|---|
| End bp | 334163 |
|---|
| Gene Length | 2373 bp |
|---|
| Protein Length | 790 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | |
|---|
| Product | glycoside hydrolase family 3 domain protein |
|---|
| Protein accession | YP_003632556 |
|---|
| Protein GI | 296125304 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATAATA AATACAGCAA AAAAATCAAA GAAATAATAA ATGAAATGAC ATTAGAAGAA
AAAGTTTCGC TTTTAAGCGG CAAAGATTTT TGGTCAACAA AACCTATACA CAGACTGCAT
ATAGATTCAA TATATCTTAC AGACGGTCCT CATGGAGTAA GAAGGCAAAG TACAGAAGCT
GATAAACTAA CTCTGCAGAA ATCTGAAGCC TCAACCTGTT TTCCCACTGC CTGCTGCAGT
GCATGTTCTT TTGACTCTAA TATAATGTAT GAAATGGGCG AAGCTATATC AAGAGAGGCT
AAAGCTAATA ATGTATCTGT AGTATTAGGT CCGGGTATAA ATATAAAACG CTCGCCTCTT
TGCGGACGTA ATTTTGAATA TTTTTCTGAA GACCCATATC TAGCTGGAAA AATGGCATCA
GGTTGGATAA GCGGTTTAGA AGATAACGGA ATACAGTCAA GTTTAAAACA TTTTGCGGCG
AACAATCAGG AAACTTTAAG ACTGGTAATA GACAGTGTAG TTGATGAGCG TGCTTTGAGA
GAAATATATT TATATGCTTT TGAAATAGCC GTGAAAGAAT CAAAACCTTC TACTGTTATG
TGTTCATATA ATAGTGTTAA TGGAACATTT GCTTCTGAAA ATAAATATTT ATTAACTAAT
ATATTAAGAG ATGAATGGGG ATTTGACGGC ATTGTTGTTT CAGATTGGGG GGCAGTTAAT
GACAGAGTTG AAGCTTTAAA GGCAGGACTT GATTTGCAAA TGCCTTCTAC AAACGGATAT
GATGATAAAA AAGTTTATGA AGCTATTAAA GAAAATAAAT TAGATGAAAA AATATTAAAT
AAAGCCGTAG AAAGACTTTT ATATTTCGCT CTTTATTCTA TGGATAATAT ATATAATAAT
TTCACATACG ATAAAGAAGA AAATCATAAT ACAGCAAGAA AAATCGCAGA AAACTCAATA
GTATTATTAA AAAATGAAGA TAAAATACTT CCTGCAAAAA AAGAAAGCAA AATAGCAGTT
ATTGGAGAGT TTGCTCAGAA ACCTAGATAT CAAGGAAATG GAAGCTCACT TATAAATGCA
TACAAAATAG ATACTGCAGA AGAATATTTT AAAGAAAATA ATTTAGAGTT TAATTATGCT
AAAGGTTATA ATTCTGACTC TTCAGAAATA GATAATTCAT TGATACAAGA AGCTGTCAAT
ATATCAAAAG ATAAAGATTT GGTAATAATA TTTGCAGGAC TTATAAACTC ATATGAATCC
GAAGGATTTG ACAGAAAGCA TCTTAATCTT CCTGAAAATC ATAATCACTT AATAGAAGAA
ATTTCAAAAG TAAATAAAAA TATAGTTGTA GTTCTTTCAA TAGGTGCTCC AGTTTTAATG
CCTTGGGTTG ATAAAGTAAA AGGAATAGTT AATTTATATT TGGCTGGAGA AGCTGCTGTA
AGTGCCGCTT TTAATATTAT ATTTGGAATA GTTAATCCAA GCGGAAAATT AGCAGAAACT
TTTCCATTGA GTTTGGAAGA TAATCCAAGC TATAAATATT TTCCCGGAGG AAATAAAGCT
GTTGAATATA GAGAATCAAT TTTTGTAGGG TATAGATATT ATGATAAAGC AGAGAAGGAA
GTTTTATTCC CATTTGGGTA TGGACTTTCA TATACTACGT TTAAATTTTC AAATTTAATA
GTTTCAGATG CAAATACGGT TGCAGGCTTG GATAATATAC ATGTTGTATT TGACGTTCAA
AATACTGGAG ATGTATTCGG CTGCGAAGCG GCTCAGTTAT ATGTATCTGC ACCAGAAAAT
AATATATTTA AAGCAAAAAG AGAATTAAAA GGTTTTATAA AAGTATTTTT AGAGCCTAAT
GAAACAAAAA CTGTAATATT AAAACTAAAC AAAAGAAGCT TTTCATTCTA TAATACTGAA
ACAAAAAAAT ATGAAATAGA AAGCGGCATT TATACAATAT CTGTAGGTAA CTCTTCAAGA
AATTTGCCAT TAAGCAAAAA TATAGAAATT AATGCCGAAA GCTATTATCA AAAAAGAATA
CCAAGCTATT TTAATTTTAA AGATATTAAT ATACCAGATG AAGACTTTGA AGAATTAATG
GAAAGAAAAT TAAAGCCAAT TAATATAAAA GCAGTAAAAC CTTATAATCT TAATAATAAT
TTGTCAGACT TGATGCATGA AAAAATTGCT GAAGATTTCT ATAATAAACT GCTATCTGGA
CTTAATGATA TGTTTAAAGA TGATAAAACA GACACAAAAA AGATGTTTGA AAGTATGATA
TTAGAAACAC CTCTTCGTTC ATTGGCAACT ATGAGCTGCG GGCTTATTAC TAGAAACGAT
ATAGAGAAAC TTCTAAATAC TTTAAATAGT TAA
|
|---|
| Protein sequence | MYNKYSKKIK EIINEMTLEE KVSLLSGKDF WSTKPIHRLH IDSIYLTDGP HGVRRQSTEA
DKLTLQKSEA STCFPTACCS ACSFDSNIMY EMGEAISREA KANNVSVVLG PGINIKRSPL
CGRNFEYFSE DPYLAGKMAS GWISGLEDNG IQSSLKHFAA NNQETLRLVI DSVVDERALR
EIYLYAFEIA VKESKPSTVM CSYNSVNGTF ASENKYLLTN ILRDEWGFDG IVVSDWGAVN
DRVEALKAGL DLQMPSTNGY DDKKVYEAIK ENKLDEKILN KAVERLLYFA LYSMDNIYNN
FTYDKEENHN TARKIAENSI VLLKNEDKIL PAKKESKIAV IGEFAQKPRY QGNGSSLINA
YKIDTAEEYF KENNLEFNYA KGYNSDSSEI DNSLIQEAVN ISKDKDLVII FAGLINSYES
EGFDRKHLNL PENHNHLIEE ISKVNKNIVV VLSIGAPVLM PWVDKVKGIV NLYLAGEAAV
SAAFNIIFGI VNPSGKLAET FPLSLEDNPS YKYFPGGNKA VEYRESIFVG YRYYDKAEKE
VLFPFGYGLS YTTFKFSNLI VSDANTVAGL DNIHVVFDVQ NTGDVFGCEA AQLYVSAPEN
NIFKAKRELK GFIKVFLEPN ETKTVILKLN KRSFSFYNTE TKKYEIESGI YTISVGNSSR
NLPLSKNIEI NAESYYQKRI PSYFNFKDIN IPDEDFEELM ERKLKPINIK AVKPYNLNNN
LSDLMHEKIA EDFYNKLLSG LNDMFKDDKT DTKKMFESMI LETPLRSLAT MSCGLITRND
IEKLLNTLNS
|
|---|
| |