Gene Plim_4280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_4280 
Symbol 
ID9122210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014149 
Strand+ 
Start bp25498 
End bp26154 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003632286 
Protein GI296051612 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones668 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCTC GATTCGAGCT GAAAATCACT TCCCCCGTTG GGCTTGCCAG CGCTGATGAA 
GCCGCTGGTC GAGCACTGAT TGACTTGGCA CAGGTCACAC CGATTCGGGA TGGCCAGGCC 
TTCGTCGCCT GTACTGAGAG TCGCATGCTT GCCATCGCTC GCTGCGAATC ATCAGCAACG 
AACCAGTGCC TTGTCGGTGC TGACTTGTTG CGTGAGCCCA GGAGCTTTAA CGCATTGGCA 
CCGAGAGCGT TTCCACCGGT GGACAAGCTA CTTGAGCAGG AGTTGAAACG ACCGTCTGCT 
GCAACAGTCA CATTCAATTG CCGACTGCTC AAGAAGCTGG CCAAAGCCCT TGGATCTTCG 
GATGGTCAAG TCACCATCAT CGTATCTGAT GATCCTACTT CGCCCATTAA GGTCGTCACG 
CGGACTGGTG ACATCGGCTT GTTGATGCCG GTAGAGCCAC CCATCTTTGT AATCGAAGAG 
TATGACCCTC CCGCAAAGCG TCAGGCGTCT GCTGATGAAT GCTGGAGGCT TCAAGCTCAA 
GAATACGTGG ACGCTCACGA AAGATCGCAA GCGTCAGCAG CCGTGACGCC ACAGGCTCAG 
CCTGCAGGTT CCGATATAGA TCGGAAATCG GAAGGGGGCC AGGCTCATGG TGATTGA
 
Protein sequence
MSARFELKIT SPVGLASADE AAGRALIDLA QVTPIRDGQA FVACTESRML AIARCESSAT 
NQCLVGADLL REPRSFNALA PRAFPPVDKL LEQELKRPSA ATVTFNCRLL KKLAKALGSS 
DGQVTIIVSD DPTSPIKVVT RTGDIGLLMP VEPPIFVIEE YDPPAKRQAS ADECWRLQAQ 
EYVDAHERSQ ASAAVTPQAQ PAGSDIDRKS EGGQAHGD