Gene Plim_4277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_4277 
Symbol 
ID9122207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014149 
Strand+ 
Start bp22906 
End bp23475 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003632283 
Protein GI296051609 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones602 
Plasmid unclonability p-value0.00893767 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAC TTTCCGGCTG CGCTGTCGTC TGCTTTCTCG GTCTCGTTGC GTTATGCATC 
ATCCCTGCCA TTTTCGCCAA AAGAGGTGGG CCCGCAACCA ACAGAGTCAC ACCTCAGCCA 
GTGGGCCCAG CGAAGCCGGT TGATCAGTCG GATGTCAAAG TCATTCCCGG TTTAATGCCA 
GTGGATATCT ACATGAATCT GACGAAGCAG GGATTCCTGA AACAGGGGCC TGTCGGTAGT 
CCACCCATGT GGAGACTCAC GCGGGAATCA GATGGCGTCA AGATGGACGT GGAGATCTTC 
TCTCCGGGCA GCATGAGCAG CGTGTCGTCG GTCAGAGCAT TTTGTTTTTC GCCATCTGGC 
GTGCGAGTTG ACGAGGCTGG GAAAATGCAG TTTCTCTTTC CTTACCTTGC CACACTTCCC 
TATCAAGGGG CCGAGCCGAT CAAGGCACAA GAGTGGGTCA TTGAGCATAT GAAAACAGGG 
GGCGAGACGA TCATTGGCTC GGTCAAGTTT GAGATTCTTG GGGCTGATAA TGAGTTTTCA 
CGGAGCCTGA GAATCAGCGT TGTCGAGTAG
 
Protein sequence
MKRLSGCAVV CFLGLVALCI IPAIFAKRGG PATNRVTPQP VGPAKPVDQS DVKVIPGLMP 
VDIYMNLTKQ GFLKQGPVGS PPMWRLTRES DGVKMDVEIF SPGSMSSVSS VRAFCFSPSG 
VRVDEAGKMQ FLFPYLATLP YQGAEPIKAQ EWVIEHMKTG GETIIGSVKF EILGADNEFS 
RSLRISVVE