| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_4265 |
|---|
| Symbol | |
|---|
| ID | 9122195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014149 |
|---|
| Strand | + |
|---|
| Start bp | 15650 |
|---|
| End bp | 17374 |
|---|
| Gene Length | 1725 bp |
|---|
| Protein Length | 574 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003632271 |
|---|
| Protein GI | 296051597 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 536 |
|---|
| Plasmid unclonability p-value | 0.877453 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGTGA AAGTTGCAGA TCGCGTTCTC GAAACCACGA ACACCACAGG GACTGGCAGC
TTCCAGCTGC TGGGGACTCA GACTGGTTTT GTGCGGTTTC GCGACGGCGG GATTCTGACA
GGCGAGCAGG TCTATTATGT GGCCGAACAT CCCACGCTGG ATGAGTGGGA AGTTGGCGTC
GGCACGTTGA CCACGGGCAC TCCCGATGTG CTGGCCCGGG TGCAGATCCT GAGCAGCTCG
AATGCCGGTT CGGCAGTCAG CTTTTCACCC GGCCGCAAAC GCATCCGCTG CACGTTGCCG
GCAGAGGCCT TGGAAGATTA CGGCGATCTC TTAGGGCAAA TCAATTCACA CGCCTCACGT
CACAAGCATG GCGGGGCGGA TGAAGTGGCC ACAGCTACGC CAGCAGCCAA TGCGATCCCC
AAAGCCGGGG CGGGTGGCAG CCTGGCAGAT GGCTGGATTC CCTCACTGGC CATCAGCAAA
ACCACTGGCC TGCAGGCGGC ACTGGACGCT AAGGCAGCTC TGTCTCACAA TCACGGCGAT
GCCGATCTAA TAGCCCTCGA TGCTGCCAAG CTGACCGGCA CGATTGATCC AGCTCGTTTG
CCAGTGCTCC CCAGTTCGGT GCAGATCGTG TCGAGTGGCG GAATTGCTGA CCTGACCTCT
CCCCAGCAGG CAGAGATCGG GGACGGCTCG ATCGTCACCA CGACCGATGG GCGACGATGG
GTCTATACAG GATCCGGGAG CAAGACCTCC GAGGCCAGCT ATATCGAGCT GGCAGACCTC
ACTCCGGAAT GGAGTGTCAT TGCCAACAAG CCCGCGATCC TCACTGCGAT CGATGCCCTG
TCTGCGGCTG GAATCATTGC CCGCACAGGA GCAGGCACAG TCGCAGCTCG CACCATCACA
CAGGGAACAG GCGTCACTGT CACGAATGGC GATGGCGTCT CAGGTAATCC GACGATTGCG
ATTGGTCAAG CGGTGGCGAC GACAAGCGAT GTGACTTTCA ACACATTAAC GACCACCAGC
ACGGCAAACG TGCAAGGATC AATGCGAGTT GGTTCAGCGG GGGCGGTGGG CAACGCCAGC
TACATGATGC AGGTTGTGCA GAATGCAGCA TCAACTCGCA ATTTTGTTGT TGAGAATAGC
AGCGGAACAC ATAACGCGGG TTTTGTTGTC ATTGCTGGTT CTCGAAACAT GTCATTCACC
CAAACGCCAA GCGGCGCTTC GGGCATGACT GTCACTGGTG GCGGCGATCT GCTTTTCAAC
ATTGGATCGG CTGATCGACA CTACATGCAG GCCGCTGGAT CATTCCGAGA CTTTGGTATT
TCCTCTACAC CAAGCGGCGT ATCTGGATGG GCAACCCGAT GGGCTGACAC TTCTGGAAAT
TGGTATACGC GAGCGGGAAC TGGCTCGATT TACCGCCTCG GAGCTCAAGG TCTGTTCGCG
ATCACCTACG GGGCGACGAT CACTCCGGAC GCGAACAACG GGCCGGTGCA GTCCTGCACG
CTCACGGGGG CGGTGACAGT CGCTGCTCCA ACAAACATGT CATCGGGTGA TTTCCTCAAT
CTGGTGCTCA TCCAGGATGG CACTGGTGGC AGAGCAGTCA CCCTTTCGGC TTTTTCCCTG
ACCAGCAACT CGGCGGCGAT TGATACGACC GCCAATAAGC GGCAGGAAAT TCAGATCCGC
CGCGACGGTT CCATTTATCG AGCCCATGTT CTCGGGAGCT ATTAA
|
|---|
| Protein sequence | MAVKVADRVL ETTNTTGTGS FQLLGTQTGF VRFRDGGILT GEQVYYVAEH PTLDEWEVGV
GTLTTGTPDV LARVQILSSS NAGSAVSFSP GRKRIRCTLP AEALEDYGDL LGQINSHASR
HKHGGADEVA TATPAANAIP KAGAGGSLAD GWIPSLAISK TTGLQAALDA KAALSHNHGD
ADLIALDAAK LTGTIDPARL PVLPSSVQIV SSGGIADLTS PQQAEIGDGS IVTTTDGRRW
VYTGSGSKTS EASYIELADL TPEWSVIANK PAILTAIDAL SAAGIIARTG AGTVAARTIT
QGTGVTVTNG DGVSGNPTIA IGQAVATTSD VTFNTLTTTS TANVQGSMRV GSAGAVGNAS
YMMQVVQNAA STRNFVVENS SGTHNAGFVV IAGSRNMSFT QTPSGASGMT VTGGGDLLFN
IGSADRHYMQ AAGSFRDFGI SSTPSGVSGW ATRWADTSGN WYTRAGTGSI YRLGAQGLFA
ITYGATITPD ANNGPVQSCT LTGAVTVAAP TNMSSGDFLN LVLIQDGTGG RAVTLSAFSL
TSNSAAIDTT ANKRQEIQIR RDGSIYRAHV LGSY
|
|---|
| |