Gene Plim_4250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_4250 
Symbol 
ID9122180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014149 
Strand
Start bp3509 
End bp5182 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content56% 
IMG OID 
ProductTerminase 
Protein accessionYP_003632256 
Protein GI296051582 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones652 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCCGA GGGTGAAGGA TCGGATCAAA AGGCTAGAGG GGTTGTTGGG TTCTGAGCGA 
CCCAAAGGCA AGCTCGAAAA GGCTTGCATC AAAAGACAGA TCGATGATCT GAAACATGGC
CATAAGCGAG GGCTGGTCTG GAATGAAGAC GAAGCCCAGC GGGCTATCGA CTTCTATCAA
TTCCTCTGCC ACTGGAAAGG GGAGTGGGCA GGCAAGCCAC TCGACCTGGA GCTGTGGCAA
CAAGAGTTGA TCATTGCTCC GATCTTCGGC TGGTATCTGC AGGACGGCAG CCGCCGATTC
CGTACGGGAT ACATTGAGAT CCCTCGCAAG AATGGCAAGA CCACGATCGC TGCAGGCATC
GCCCTGCGAG GTCTGACTGC CGATCTCGAA AGCGGTGCCG AAGTCTATTG TGCAGCGACA
AAGCGAGATC AGGCCAAGCT GCTCTTCCGT GATGCGACGA ACTTCATCCG CAAAGCCGAA
TATCTCAAGA GGCGGCTGAA GATCCAGAAG CATGCTCTCC TTTGCCCCAA GCTGAGCAGC
TCACTGGTAC CGCTGTCGAG TGATGCAAAC ACGCTCGATG GATTGAACCC ACACATGACT
GTTGTGGACG AGCTGCACGC TCACCGCACA CGTGACCTGT GGGACGTCAT GGCCACAGCC
TCTGGCAGCC GGAACCGTTC TCTGCTGCTG GCGATCACAA CGGCTGGTCA CGACCGCACC
TCCGTTTGCT GGGAGCAGCG AGATTACAGC CAAAAGCTGC TGACGGGATC GATTGAGGAC
GATAGCTATT TCTGCTTCAT CGCATGTGCT GACGAGAAGG ATGATCCCTT CGATCCGATG
ACATGGTGGA AGGCAAATCC CAATCTCGAC ATCAGCCTCA AGCGGACGTT TATTGAGAAT
CAGGCCCGCA AAGCCAAGGC CTCACCCAGT TACGAGAACA CCTTTCGTCG GCTGCATCTC
AATCAATGGA CTGAGGCTGA GACACGCTGG CTGAAGATGT CCGACTGGGC CAAGGCGGCT
GAGGAATTTG ACTTGTCCTG GCTGGTCGGT GAGCGATGCT TCGCGGGCCT TGATCTCTCC
AAGGTCAACG ACACGAGTGC CTTGGTTCTG GTCACTGAGA TCGATGGCGA CTGGTATCTC
GTTCCGTGGT TCTGGATCCC GGGCGACAAT GCTTTCCGTC GAGAGGCAGA GCATCAGGTG
CCATACACCG TCTGGCAGCG ATCGGGACAT ATCCATTTCA CCGATGGGGA TGTCGTGGAC
TACAGCTGGA TCGGCAAGAC CCTCATGGAG ATTGCCGGCA CGGTGCAGCT GGAGGGCGTT
GCCTATGACC CGTACAACGC CAGCCACTTC GCTCAGCAGA TGATTGGCGA AGGTCTGCCG
ATGGTCGAGT TTCCCCAGAG CTGGCGGAAC CTGGCTGATG CGACCAGTGA GTTCGAGAAG
CTCCTCGTCT CTGGCAACTT GCATCACAAC AACAACCCGG TGTTCAACTG GCAGGCCGGG
AATGTCTCAG TCAGGCGCAA CCCTTCCGGT CAGATTAGAC CAGCGAAACC AATGTCAGAG
GACGCCAAGA AGATTGACGG GATTGCAGCT GCCATCATGG GTCTGGCACT GGCCACTCGT
AGTCAGCAGG CATCACCATC GGTCTACGAG ACACGAGGAT TCGTCACGCT GTGA
 
Protein sequence
MDPRVKDRIK RLEGLLGSER PKGKLEKACI KRQIDDLKHG HKRGLVWNED EAQRAIDFYQ 
FLCHWKGEWA GKPLDLELWQ QELIIAPIFG WYLQDGSRRF RTGYIEIPRK NGKTTIAAGI
ALRGLTADLE SGAEVYCAAT KRDQAKLLFR DATNFIRKAE YLKRRLKIQK HALLCPKLSS
SLVPLSSDAN TLDGLNPHMT VVDELHAHRT RDLWDVMATA SGSRNRSLLL AITTAGHDRT
SVCWEQRDYS QKLLTGSIED DSYFCFIACA DEKDDPFDPM TWWKANPNLD ISLKRTFIEN
QARKAKASPS YENTFRRLHL NQWTEAETRW LKMSDWAKAA EEFDLSWLVG ERCFAGLDLS
KVNDTSALVL VTEIDGDWYL VPWFWIPGDN AFRREAEHQV PYTVWQRSGH IHFTDGDVVD
YSWIGKTLME IAGTVQLEGV AYDPYNASHF AQQMIGEGLP MVEFPQSWRN LADATSEFEK
LLVSGNLHHN NNPVFNWQAG NVSVRRNPSG QIRPAKPMSE DAKKIDGIAA AIMGLALATR
SQQASPSVYE TRGFVTL