Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_4250 |
Symbol | |
ID | 9122180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014149 |
Strand | + |
Start bp | 3509 |
End bp | 5182 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | Terminase |
Protein accession | YP_003632256 |
Protein GI | 296051582 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 652 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATCCGA GGGTGAAGGA TCGGATCAAA AGGCTAGAGG GGTTGTTGGG TTCTGAGCGA CCCAAAGGCA AGCTCGAAAA GGCTTGCATC AAAAGACAGA TCGATGATCT GAAACATGGC CATAAGCGAG GGCTGGTCTG GAATGAAGAC GAAGCCCAGC GGGCTATCGA CTTCTATCAA TTCCTCTGCC ACTGGAAAGG GGAGTGGGCA GGCAAGCCAC TCGACCTGGA GCTGTGGCAA CAAGAGTTGA TCATTGCTCC GATCTTCGGC TGGTATCTGC AGGACGGCAG CCGCCGATTC CGTACGGGAT ACATTGAGAT CCCTCGCAAG AATGGCAAGA CCACGATCGC TGCAGGCATC GCCCTGCGAG GTCTGACTGC CGATCTCGAA AGCGGTGCCG AAGTCTATTG TGCAGCGACA AAGCGAGATC AGGCCAAGCT GCTCTTCCGT GATGCGACGA ACTTCATCCG CAAAGCCGAA TATCTCAAGA GGCGGCTGAA GATCCAGAAG CATGCTCTCC TTTGCCCCAA GCTGAGCAGC TCACTGGTAC CGCTGTCGAG TGATGCAAAC ACGCTCGATG GATTGAACCC ACACATGACT GTTGTGGACG AGCTGCACGC TCACCGCACA CGTGACCTGT GGGACGTCAT GGCCACAGCC TCTGGCAGCC GGAACCGTTC TCTGCTGCTG GCGATCACAA CGGCTGGTCA CGACCGCACC TCCGTTTGCT GGGAGCAGCG AGATTACAGC CAAAAGCTGC TGACGGGATC GATTGAGGAC GATAGCTATT TCTGCTTCAT CGCATGTGCT GACGAGAAGG ATGATCCCTT CGATCCGATG ACATGGTGGA AGGCAAATCC CAATCTCGAC ATCAGCCTCA AGCGGACGTT TATTGAGAAT CAGGCCCGCA AAGCCAAGGC CTCACCCAGT TACGAGAACA CCTTTCGTCG GCTGCATCTC AATCAATGGA CTGAGGCTGA GACACGCTGG CTGAAGATGT CCGACTGGGC CAAGGCGGCT GAGGAATTTG ACTTGTCCTG GCTGGTCGGT GAGCGATGCT TCGCGGGCCT TGATCTCTCC AAGGTCAACG ACACGAGTGC CTTGGTTCTG GTCACTGAGA TCGATGGCGA CTGGTATCTC GTTCCGTGGT TCTGGATCCC GGGCGACAAT GCTTTCCGTC GAGAGGCAGA GCATCAGGTG CCATACACCG TCTGGCAGCG ATCGGGACAT ATCCATTTCA CCGATGGGGA TGTCGTGGAC TACAGCTGGA TCGGCAAGAC CCTCATGGAG ATTGCCGGCA CGGTGCAGCT GGAGGGCGTT GCCTATGACC CGTACAACGC CAGCCACTTC GCTCAGCAGA TGATTGGCGA AGGTCTGCCG ATGGTCGAGT TTCCCCAGAG CTGGCGGAAC CTGGCTGATG CGACCAGTGA GTTCGAGAAG CTCCTCGTCT CTGGCAACTT GCATCACAAC AACAACCCGG TGTTCAACTG GCAGGCCGGG AATGTCTCAG TCAGGCGCAA CCCTTCCGGT CAGATTAGAC CAGCGAAACC AATGTCAGAG GACGCCAAGA AGATTGACGG GATTGCAGCT GCCATCATGG GTCTGGCACT GGCCACTCGT AGTCAGCAGG CATCACCATC GGTCTACGAG ACACGAGGAT TCGTCACGCT GTGA
|
Protein sequence | MDPRVKDRIK RLEGLLGSER PKGKLEKACI KRQIDDLKHG HKRGLVWNED EAQRAIDFYQ FLCHWKGEWA GKPLDLELWQ QELIIAPIFG WYLQDGSRRF RTGYIEIPRK NGKTTIAAGI ALRGLTADLE SGAEVYCAAT KRDQAKLLFR DATNFIRKAE YLKRRLKIQK HALLCPKLSS SLVPLSSDAN TLDGLNPHMT VVDELHAHRT RDLWDVMATA SGSRNRSLLL AITTAGHDRT SVCWEQRDYS QKLLTGSIED DSYFCFIACA DEKDDPFDPM TWWKANPNLD ISLKRTFIEN QARKAKASPS YENTFRRLHL NQWTEAETRW LKMSDWAKAA EEFDLSWLVG ERCFAGLDLS KVNDTSALVL VTEIDGDWYL VPWFWIPGDN AFRREAEHQV PYTVWQRSGH IHFTDGDVVD YSWIGKTLME IAGTVQLEGV AYDPYNASHF AQQMIGEGLP MVEFPQSWRN LADATSEFEK LLVSGNLHHN NNPVFNWQAG NVSVRRNPSG QIRPAKPMSE DAKKIDGIAA AIMGLALATR SQQASPSVYE TRGFVTL
|
| |