Gene Plim_4246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_4246 
Symbol 
ID9122176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014149 
Strand
Start bp1184 
End bp2218 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content59% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003632252 
Protein GI296051578 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones641 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGTCT GGCTCATTCG GCTGATCATC ACGTTAATCA TCAGCTCACT GCTCTGCGTG 
GCAGTTGGTG CTATCGGCCT GCTCATGCCT GGCACGCCTC CTGTCAACTA CGGCCTGGCC
GCTGGCTGGC GTGAATCATT TGCCGAGGTG CTCAGGGAAA CGCCAAGGTC TTTCTCGGAC
GTCATCGGCG AATCGAGCGA CGCGGCCTCG AAGGATGTGC GGCTGTATCG GGCCGCTCTG
TTCGTGGAAA GCCCTGCAAA GCCCTTTGGT CAGCAATTCC GCACGATCAA CCAAGGGACT
GGTGATTGTG TCGCTCAGGG CGTTCGAACA GCCCTTCGCA CCACGATGAG CGTCAAGGCG
GCCAAAGGAG AGCGAAAGGT CGTCGAACCT TTCGCCCCGT ACATCTTCGG CACGACTCGC
AAGCTGGTCT CGAGATGGCC ATGCGGTGCC GCTGGGGCTG ATCCATCGGC CGCGATGGTC
GCATTTGAGC AATACGGCAT TGTCACGGAG GAAGAAGCTG GTGTGCCCTA TAGCGGAGCC
TTGGCCAACC GCTGGGCCTG CACCGGGCCG CCTGATGCCC TTTTGAAGAT CGGTAAGCAA
CGAGCGGGTT CTTCTTTCCC GATCAGATCG GCCGAGGAGC TCTGTCAGGC GATTAACAAC
GGCTACGCCT GCACCTGGGC GACCGGAATG AAGCCAGCCC GCTACGAAGA ACGCGACGGC
CGCTGGGTCG TCACGCGTTG GGGCGGTTGG GCTCACCAGA TGGCCATTAC CGACTTCGAC
GGCTCGCGCT CTTCCGATTT ATCTCGGAAG TATTTCAACG TATGGAACTC GCACAGCGAA
GACCCCCGGA TCAGTGGTCA TCCCTTGCCG CTTGGCGATG AGCCACCCGG TAGTTTTTGG
ATGACATGGA AAGACATCGA CCGATTCATC AAGTCCGGTG ATTCGGTCGT CTATGCCATT
TCCGACGTTC AAGGCTTCGA GGCTGACGAC GTCGGAAGCC TCCTCAAGAA CCTCTTTCAG
GAATCCGCAA GATGA
 
Protein sequence
MPVWLIRLII TLIISSLLCV AVGAIGLLMP GTPPVNYGLA AGWRESFAEV LRETPRSFSD 
VIGESSDAAS KDVRLYRAAL FVESPAKPFG QQFRTINQGT GDCVAQGVRT ALRTTMSVKA
AKGERKVVEP FAPYIFGTTR KLVSRWPCGA AGADPSAAMV AFEQYGIVTE EEAGVPYSGA
LANRWACTGP PDALLKIGKQ RAGSSFPIRS AEELCQAINN GYACTWATGM KPARYEERDG
RWVVTRWGGW AHQMAITDFD GSRSSDLSRK YFNVWNSHSE DPRISGHPLP LGDEPPGSFW
MTWKDIDRFI KSGDSVVYAI SDVQGFEADD VGSLLKNLFQ ESAR