Gene Plim_4245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_4245 
Symbol 
ID9122235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014149 
Strand
Start bp21 
End bp1133 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content58% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003632251 
Protein GI296051577 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones654 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAAGT TCATTTTGTC GTTCTTGGCA ACCTTGTGGG CGAATCAGAA AGTCCGCTCG 
ATCGTGAAGT CCGGCGGCCT GACGCTGACC GGGATTGCCG CTGCAGCCCT GGCTGGCTCA
CTGGTCAACC TCGATACTCG TTGGATCGTT GCAGTCACCG CAGTGACTCC ATTTTTAATC
AACGTCCTTC TAAAGATGTA CCCAAGTGAT GGAGACGACA CGAACGGCGA TTCTTTGAAT
GATTATGTTC AGATCGCAAT CAAGAAGTGG CTTGAAGGAC TGGATTCCGG GAAGGTCTCG
ATCGACGATG CAAGAAAGCT CAATTCTTGG ATCGATGATC TTTTCAAAAA GACGCCCATG
ATCCTGTTAT GTGGCCTGCC ATTCCTACTG GCTGGTTGTG ACTATAGCGG CCCGACTCAG
GCACCTCGCG TGGTCATCAG CGGGCCCACA ACTGGCGTGC CTGGTGAGCT GCTGTTGCTC
GATGCCAGCG CGACCGAAAA CAGCCCTCAG CATTTTCGCT GGACGATTTC GCCCGCATTG
CCCGGCCGCC AGCAGCTCAT CGTCCAAGAC GGTGGCAAGC GGTGTTTTGT CGCCGGTTAC
CCGGGCTCGT TCGTCGTGAC CTGTTCGGCC AGCAATCGGG CGGGCGTGGA TACGTTGACC
CATGCGATCA CAACGCCTGG CACGCCGCCA GGGCCGCCGC CTGCTCCAAT CGTGCCAAAG
CCCGACCCAA CGCCGAACAT CACTCCACAG CCCAAGCCTG AGCCTCCTAC GCCTCCAGCT
CCTGCCCCCG AACCAATCGC CAAAACCTTT GGCATCGGTC CAGCGATCAC GGACGTGGCC
AGGTCGATCA ATTCGCCGGA TCGATCAGGG ACCTGCAGGA GGCTGGCCAG TGAGGCCCGC
AGAGTGGCCG AGGACAAGAA CCTGAAGACT CAGGCAGCCA TCCTCACGGC GGCCATGAAG
CCTATCGGTG CTCTGGGCAG CGAATGGCAG CCCCTGAAAG ACCTGCTCAA GTCTCAAATC
ACCAAGCTCT ATGGCGATGG CAAGCTGGTC ACGAATGACG ACTACATCGC CCTGCTCAAC
GAGGTTGCGA AAGCCCTCGA CGCCGCTGCC TGA
 
Protein sequence
MLKFILSFLA TLWANQKVRS IVKSGGLTLT GIAAAALAGS LVNLDTRWIV AVTAVTPFLI 
NVLLKMYPSD GDDTNGDSLN DYVQIAIKKW LEGLDSGKVS IDDARKLNSW IDDLFKKTPM
ILLCGLPFLL AGCDYSGPTQ APRVVISGPT TGVPGELLLL DASATENSPQ HFRWTISPAL
PGRQQLIVQD GGKRCFVAGY PGSFVVTCSA SNRAGVDTLT HAITTPGTPP GPPPAPIVPK
PDPTPNITPQ PKPEPPTPPA PAPEPIAKTF GIGPAITDVA RSINSPDRSG TCRRLASEAR
RVAEDKNLKT QAAILTAAMK PIGALGSEWQ PLKDLLKSQI TKLYGDGKLV TNDDYIALLN
EVAKALDAAA