Gene Plim_4240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_4240 
Symbol 
ID9140962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp5414813 
End bp5416285 
Gene Length1473 bp 
Protein Length490 aa 
Translation table11 
GC content54% 
IMG OID 
ProductPyrrolo-quinoline quinone 
Protein accessionYP_003632246 
Protein GI296124468 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00516774 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCGAT GGTACTTGCA GGTTTGTGGT TGGATCACGG CTGGTCTGTC TCTTTGGGGC 
ACATCTCAGG CGACAGAAGT ATGGCCTGGC TTTCGAGGCC GGGGAGACAG CCATATGGAT
GGTGGCCAAC TCCCATGGTC CTGGGAAGCG CGAGGTCAAG TTCAAGGGAA CTGGTCGATC
CGACTCAAAG GCTATGGGCA ATCCAGCCCT GTCGTCTGGA AAAATGTCGT CTATGTGACA
TCCATCTCGG GAGAGATGAA GGAGCACCTG CACCTTTTCG CGTTTCATCT TGCTGACGGT
GCCCTTCTTT GGGAGAAGGA GTTTTCCGCC ACTCAGAAGG TCAAGGACAG CGACACCGTT
AGCCGGGGGG CTCCGACGCC AGTTGTAGAT GATGGTCATG TTTATGCCAT GTTTGAAAGT
GGCGATCTCT TTGCACTCGA CCACTCAGGA AATCTGAAGT GGGAGCGATC TATTGTCAAA
GACTATGGTG AGTTCAAGGG CCCGCATGGC TATGCCAGTT CACCGCTGCT GGTGAACGAC
CTGTGTGTCA TTCAAGTGGC GCATTCAGGC CCTTCTTACA TTCTGGCTCT GGATCGAAAG
TCAGGCCAGA ACCGCTGGAA GGTTGATCAT CCGTCACAAA CAGGGTGGAG TTCGCCGGCA
GTTTACGACA AGGATGGCCA GTCTCAGATC CTGATTTCGA CTGCCGGGAG TGTCCGCTCT
TTGAATCCTG AGAATGGGGC CACACTTTGG ATGAGTGAAG AGATCCAGGG CAACTCCACA
GCATCTCCCA CAGTGGTCGG AGATCTCGTC GTGATTGGTG CCGCAACAGA GCGGGGTGGT
GGGGGCGGAC GACGCACTGG GACAACCCCA CCTGGCGTCA CTCCATCTGC TCCGACTTCA
AGTTCACCTG TTCAGACTTC TCAGGGTGAA CAGCCTCAGG ACGCAACATC AAAACCTCCG
GGTCCTTCAG GAAATGAATC GGCGGGTTCG CCATCCAGCA GTGAGCGTCC GCAGAGTCCA
CCCTCCAGCA AACCTACAGG AAGTGGCGTT TTTCGCCTGC ATGATCTTTC GGCCGATCAG
ACTCGTCTGG TCTGGAAATC GGATAAGGTT TCTTCGGGCT ATGCTTCACC CGTTGTTGTG
GGAGATTTCG TCTACTTCGT GAATCGAGTG GGTGTCGTGA CTTGTGCAAG ACTCAGCGAT
GGAGCGATCC AGTGGCAACA CAGGCTCCCC GGTGAAGTCT GGGCCTCTCC GATTGCCAAT
AATGGACACG TCACTTTCTT TGGAAAGTTT GGCTTTGTGG TCACGCTCAA AAGCGGGCCA
CAGATTGAAG AGATCGGCGA AAGCAATATC TCGACAACCG AGGTCGTTTA TGGAGTTGCA
GCCGTTGATA ACAGTTGGAT TGTTCGCACT GGTCGAGGAT TGATTCGGAT CAGTGACCCA
TCGAATACGA AGCCGAGTTC TCCAGCAAAT TAA
 
Protein sequence
MNRWYLQVCG WITAGLSLWG TSQATEVWPG FRGRGDSHMD GGQLPWSWEA RGQVQGNWSI 
RLKGYGQSSP VVWKNVVYVT SISGEMKEHL HLFAFHLADG ALLWEKEFSA TQKVKDSDTV
SRGAPTPVVD DGHVYAMFES GDLFALDHSG NLKWERSIVK DYGEFKGPHG YASSPLLVND
LCVIQVAHSG PSYILALDRK SGQNRWKVDH PSQTGWSSPA VYDKDGQSQI LISTAGSVRS
LNPENGATLW MSEEIQGNST ASPTVVGDLV VIGAATERGG GGGRRTGTTP PGVTPSAPTS
SSPVQTSQGE QPQDATSKPP GPSGNESAGS PSSSERPQSP PSSKPTGSGV FRLHDLSADQ
TRLVWKSDKV SSGYASPVVV GDFVYFVNRV GVVTCARLSD GAIQWQHRLP GEVWASPIAN
NGHVTFFGKF GFVVTLKSGP QIEEIGESNI STTEVVYGVA AVDNSWIVRT GRGLIRISDP
SNTKPSSPAN