Gene Plim_4224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_4224 
Symbol 
ID9140945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp5396463 
End bp5397320 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content54% 
IMG OID 
ProductSulfate transporter/antisigma-factor antagonist STAS 
Protein accessionYP_003632231 
Protein GI296124453 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCGCT CGGATCGGAC ACATCTGCAT CAGATTTTTC CGCTGGAAGA GTATGGCGAT 
ACCCTGATCA TTACACCCAC TGGTGATGCT GCTGGATTTC ATCTGCCCCA TGTGCATGCC
GAGATGGCTG CTGCCACCGA CTATTTTGAC AAATCTGAGT TAAAGCACCT CGTGTTTGAC
CTGAGCAGGG CGAGATACTT CGGTTCGCAG ATCCTTGGGC AATTGATTGT ATTCAGCCAG
AAAGTGAAGA GTCAGGGGGG CCGCGTGGCC TTGGCCAATC CCTCAACCGA AATGCTGGAT
GTGCTGCGGA TCATGAAAGT CGATTCGATC TGGGAAGTAT TTCCGTCGCG GAATAAGGCC
CTCTCGACCA TTGCCAGTCG CCCGTTTTCC GCTCACCTGG TGCAGTTTGG GAGGCGCAGC
TTTCCAGTAG TCCTGCTGGG TTGCCTGGGG GCTGCCTGGT GGTACTGGCC CCGCAGAAAT
CTCGATCATC ATTATCACGA TCAACTGCTG GGGATTTACC GCGAGAGCCG ACAGCTGCTC
GACGCCAACC CGCGTGATCA AGACTGGGAT CAACATCTGA CCAGATCCCG GCAACAGCTT
GAGAAAATCA CTGCTGAACT GGAGACGATT GCATCAAGTC AGCGAGAGGC TTTGCGGCGG
ATGATCTATT GCTCGCGCGA TTATCTGTTC CCCGCCTTGC AGGACAAACT CAAGCTCGAT
TCCTATCCGC ATTTCATGTT CTTTCAGGAA ATGAAGGCAG GTGAGAAGGA AATGCGCGAG
CCGGTCAAAA CCTTATCAGA GACTCTGCGT CCCGAGGGTT TAACGAATCC CCGTGCTCTC
CCTGCCAATC CCTCATGA
 
Protein sequence
MSRSDRTHLH QIFPLEEYGD TLIITPTGDA AGFHLPHVHA EMAAATDYFD KSELKHLVFD 
LSRARYFGSQ ILGQLIVFSQ KVKSQGGRVA LANPSTEMLD VLRIMKVDSI WEVFPSRNKA
LSTIASRPFS AHLVQFGRRS FPVVLLGCLG AAWWYWPRRN LDHHYHDQLL GIYRESRQLL
DANPRDQDWD QHLTRSRQQL EKITAELETI ASSQREALRR MIYCSRDYLF PALQDKLKLD
SYPHFMFFQE MKAGEKEMRE PVKTLSETLR PEGLTNPRAL PANPS