Gene Plim_4196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_4196 
Symbol 
ID9140917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp5367167 
End bp5368267 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content55% 
IMG OID 
Productglycosyl transferase group 1 
Protein accessionYP_003632203 
Protein GI296124425 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCTCTT CGAACTTCCA GTTTCGGGGG AGTTCGGTCT ACACCCTCAG GCTGGCCGAA 
CGATTGCCTG AATACGGGTT TGTTCAGAGT ATTGTCTGCC CCGGTGCCTC GACGGTTGAT
CTGGCGCGTC GCAAGGCGTT GGGCATTGAA GTGCTCCCTT ATCTTGAAGC ACCCGCCTGG
AAGTGGGTTG TGCTGGAGCT TTATTGCCGC AAACTTCTGG CCCATCCCCC TGATCTGATT
CATATTCAAT CACGCACAGC GATGTGGCAT GGTGAATGGA TTGCCCGCCG GCTCAATCGA
CCTTATGTGC TCACAGTTCA CGATTACATG CAGAGTCATG AATTTCTGCA GCCTGATCTC
GCTTTATGCC GGCGGATAAT CACTGTGAGT GAATCGGTCA AAGCGGCACT TGTCGAGCGA
TCGGGGCTGC CGGAAGATCT CTTTGTGGTC ATTCCCTGTG GTGTGCCTCG GGCCAGTGAT
GAAGATAAAT CGCTGGTCTT GAAATCAGGG AAAGTTCCCG TGGTTGGTAC GGCAGGCCCC
CTGGAGGCTG TCAAAGGGTT TCCGTTTTTT CTCGCTGCGG CAGCCCACGT GCTCGGGACA
CATCGCGACG TCGAATTTTT GATTGCGGGG GCCGGGCCGG AAGAGACCAG TTTACGCAAG
TTAGCCCGCA CGCTGGGTAT TCATGAACAT GTGACATTTG TGCCAAATCT GCTCGATTTT
TCTGATGCGT TAAGTGCCAT GGATATCTTT TGCCTCCCTT CGCTGCAGCA GGGGATTGGC
ACCATCATGC TCGAAGCGAT GGCCATGGGC CGTCCGGTGA TTGCGACGAG TGTGGGAGGC
GTCTTCAACG TCGTTCGCGA CAATCAGACA GGGCTGCTGG TCCCTCCATC AGACAGTGTC
CGTCTGGCCG AAAGAATCAT TGAACTGCTT ACCAATCCCG AATTAGCCCG CAGAATTGGT
GCTGCTGCCA TGCTCGAAGC CGAGACCGAG TTCAATGTTG AACATATGGT GGAAGCGACA
GTCGAGGTCT ACCGTGAAGT TCTCGACGAG CGCATGGCGG GTTTGACCAC CGTTGCCATC
CCCCAGCTCT CGAAACGATA G
 
Protein sequence
MVSSNFQFRG SSVYTLRLAE RLPEYGFVQS IVCPGASTVD LARRKALGIE VLPYLEAPAW 
KWVVLELYCR KLLAHPPDLI HIQSRTAMWH GEWIARRLNR PYVLTVHDYM QSHEFLQPDL
ALCRRIITVS ESVKAALVER SGLPEDLFVV IPCGVPRASD EDKSLVLKSG KVPVVGTAGP
LEAVKGFPFF LAAAAHVLGT HRDVEFLIAG AGPEETSLRK LARTLGIHEH VTFVPNLLDF
SDALSAMDIF CLPSLQQGIG TIMLEAMAMG RPVIATSVGG VFNVVRDNQT GLLVPPSDSV
RLAERIIELL TNPELARRIG AAAMLEAETE FNVEHMVEAT VEVYREVLDE RMAGLTTVAI
PQLSKR