Gene Plim_4187 details

Gene Information

• Locus tag: Plim_4187
• ID: 9140908
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 5351853
• End bp: 5352395
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 54%
• Product: TspO/MBR family protein
• Protein accession: YP_003632194
• Protein GI: 296124416

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGGAC TTTCCAGAGC TGAAGTGAAT CTCTCACAGG AAGTTTCACA GCCCAGTCCT 
GCCACATCGA TGCTGCGGTT TGCTGTCTGT GCGGTGGTGG TCTTTGCCGC CGCTGGTTAT 
GCATCGAGCT TCACACCTGG CCCATGGTAT CGCACGTTAC AATCCCCGGT AGGGACGCCA 
CCGAACTGGA TCTTTCCTCC CGTGTGGTCT GTGCTGTATG CGCTACTGGC CATTTCCTTC 
TGGTGGTTCT GGGAACAGGC TGATGCAAAG CCACCCACTT CCAAACAGAT TTTTCGACTT 
GGTGCGGCGG TCTTTGTGGC GCAACTGGTC GCCAATGCGT TGTGGAGCCA GCTCTTTTTT 
GGCTGGCACT GGATTGGTCT GGCACTGATC AATATCGGGT TCTTATGGCT CTCGATTCTG 
GCCATGCTGC TGATCTTTCG CCGAAATTCC CCACTGGCGG CGAACCTATT GCTGCCCTAT 
CTGGCATGGG TGGGATATGC GACGTATCTA AATGCGGGAT TTGTGTATCT GAATCGTGAA 
TGA 

 

Protein sequence

MSGLSRAEVN LSQEVSQPSP ATSMLRFAVC AVVVFAAAGY ASSFTPGPWY RTLQSPVGTP 
PNWIFPPVWS VLYALLAISF WWFWEQADAK PPTSKQIFRL GAAVFVAQLV ANALWSQLFF 
GWHWIGLALI NIGFLWLSIL AMLLIFRRNS PLAANLLLPY LAWVGYATYL NAGFVYLNRE