Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_4161 |
Symbol | |
ID | 9140881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 5327168 |
End bp | 5328346 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | glycosyl transferase group 1 |
Protein accession | YP_003632170 |
Protein GI | 296124392 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATACAA TGCACTTCAT CACTCGATTG ATTGTCGGCG GTGCGCAGGA GAATACCGTT TCGAATGTCG AGGATCAGGT GCAGCTTTTC GGCGACGAGG TCACACTTGT CACCGGGCCG GGCCTGGGGC CGGAAGGTTC GCTCGAAGAG CGGGCGGCGA AATCGGGTGC CCGCTTGATT GTCATGCCCG AACTGCATCG TGCCATTCGC CCCTGGCAAG ACTGGCGAGC GTACCAGGAA CTCAGGCGGC TCATTCGCAC CTTGAAGCCC GACGTGATTC ATACCCATGC CTCGAAGGCG GGGATCATCG GCAGGCAGGC AGGGTTTGTG GAAGGTGTCC CCGTTGTGCA TACCATTCAT GGAGCCTCGT TTCATTACGG GCAGTCAGCT CCCGCCTATC GTCTCTATCG TTTTCTCGAA CAACGGGCAG GCCGGCAGAC GGCTCACTTT ATCAGCGTTT CCGATGCGAT GACCGAGCAA TACGTGGCTG CTCGAGTGGC CCCGCGAGAG AAATTCACGA CCATCCGCAG CGGCTTCGAT GTCCAACCCT ATTTGTCGCC AGTCAAGAGT CGGGCCGAAA TCCGCGCTCA ACTCGGCCTG AGCGAGAGCG ATCTTGTCGT CGGCAAGATC GCCCGGCTGT TCCACCTCAA AGGGCATCAG TACCTCATTG CCGCCGCTCC CGAAATCGTC CGGCAACAAC CTCAGGTGAA GTTTCTTCTC GTTGGTGATG GTATTCTCCG GGAGCAGTAT CAGGCGGAGA TCGCGAGGCT CGGTCTGACG GATCACTTCG TCTTCACCGG CCTCGTGCCA CCCAGCCAGA TCCCGGAGCT CATTCATGCG ATGGATGTCG TGGTCCATTG CAGCGAATGG GAAGGGTTAG CCCGCGTCTT GCCGCAGGGC TTGCTGGCAG GCAAGCCCGT CATCAGCTAC GACATCGACG GTGCCAGCGA GATCGTCCGC CCGGGTGAAA CTGGCTATCT GTTGCCGCGA GGTGATGTGC CAGGGTTGGC TAAAGCGACC ATCGAGTTGC TGGCAAATCC GCTCCTTCGC CAGCAATACG GCCAGCGGGG GCGAGAATTA TTTCAGGACG TCTTTCGTCA TGAGTATATG ACTCAGAAAA TTCGTGAGAT CTACGCGACA GTCGCTCATC CTGCGAAAGC CATCCAGGCC CTGCAATGA
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Protein sequence | MHTMHFITRL IVGGAQENTV SNVEDQVQLF GDEVTLVTGP GLGPEGSLEE RAAKSGARLI VMPELHRAIR PWQDWRAYQE LRRLIRTLKP DVIHTHASKA GIIGRQAGFV EGVPVVHTIH GASFHYGQSA PAYRLYRFLE QRAGRQTAHF ISVSDAMTEQ YVAARVAPRE KFTTIRSGFD VQPYLSPVKS RAEIRAQLGL SESDLVVGKI ARLFHLKGHQ YLIAAAPEIV RQQPQVKFLL VGDGILREQY QAEIARLGLT DHFVFTGLVP PSQIPELIHA MDVVVHCSEW EGLARVLPQG LLAGKPVISY DIDGASEIVR PGETGYLLPR GDVPGLAKAT IELLANPLLR QQYGQRGREL FQDVFRHEYM TQKIREIYAT VAHPAKAIQA LQ
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