Gene Plim_4143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_4143 
Symbol 
ID9140863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp5312871 
End bp5313740 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content56% 
IMG OID 
Productoxidoreductase FAD/NAD(P)-binding domain protein 
Protein accessionYP_003632153 
Protein GI296124375 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCCG TCCAGCAGAA GGCACGCGTG CTGCTGCACG AGGCCATGGC GAAAAATACA 
TTTCGCCTGC GGCTCGATTG TGTTGAGCTG GCGACCAAGA TCACTCCGGG GCAGTTCTTC
ATGGTGAAAA TCCCGGGAGA GAACGATCCG CTTCTGGGCC GACCGTTTGC GCTGTTTGAT
ATCTGCAGGG ATGAAGAAGG ACGTGTTGCC GGGCTGGAGT TCGGCTACGT TGTCGTGGGT
AAAATGACCG GTCGCCTGGC TCAGCTTCAG GCGGGAGATG AAGTGGAAAT CTGGGGGCCA
CTTGGCAACG GCTTTCCGGC ATCACCGGGC GGGCGGCTGG TTTTCGTCGC TGGTGGGATT
GGGCAAACGC CCTTTCTGGC ACTCGCCCGC GAAGCTCTTG GAGTACAGAG TTATCCCCAG
CAGAATCCGC GAAAAGTGGT TACGCCCAGT TCCGTCACAC TTTGTTACGG AGCGAGGAAT
GCTGAGTTTC TGGCGGGTGT CGAAGACTTC CAAAGTGTTC CCGGCCTGAA GGTTGAACTG
GCCACCGATG ATGGTTCACT GGGGCACCAT AGCTATGTCA CTCAATTACT GGAAGAACAT
CTCAAGGCTC CCGGTGAGCC CGTGACCATC TATGCCTGCG GGCCAGAACC GATGCTCAAA
GCTGTGCAGA AACTGGCACT GTCGTACAAC GTCACCTGCT GGTTATCGTT AGAAACCCCA
ATGGCGTGCG GCTTTGGAGC CTGCTTCAGT TGTGTCGCCA AAATCCGGGA AACGACTCCT
TCGGGTGAGG AAAGCTGGGA TTACCGACGC ACTTGTGTCG AAGGGCCCGT CTTCGAAGCT
CGCGAACTGA TCTTTGAAAA TCATCCTTAA
 
Protein sequence
MSAVQQKARV LLHEAMAKNT FRLRLDCVEL ATKITPGQFF MVKIPGENDP LLGRPFALFD 
ICRDEEGRVA GLEFGYVVVG KMTGRLAQLQ AGDEVEIWGP LGNGFPASPG GRLVFVAGGI
GQTPFLALAR EALGVQSYPQ QNPRKVVTPS SVTLCYGARN AEFLAGVEDF QSVPGLKVEL
ATDDGSLGHH SYVTQLLEEH LKAPGEPVTI YACGPEPMLK AVQKLALSYN VTCWLSLETP
MACGFGACFS CVAKIRETTP SGEESWDYRR TCVEGPVFEA RELIFENHP