Gene Plim_4139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_4139 
Symbol 
ID9140859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp5309050 
End bp5309904 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content56% 
IMG OID 
Productband 7 protein 
Protein accessionYP_003632149 
Protein GI296124371 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.282461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCACGA CTCAACCTTC AAGTCGATAT TCAGAACCTT CTGCCGAAAC CGCTGGCATG 
ATGGAACTGG GGCTGATCAT TGCAGCCTCG GTCATCTTTC CGCCCATTCT GCTCTTCGGG
TTCATCATTG TGGGCCCGCG CGAAGAAGTC GTGGTCTTGC GGTTTGGCAA ATATCTGACG
ACGCTGCGCA GCGAAGGGAT CCGCTGGATT CATCCCGTGG GCCGATCACT CCAGAGAATC
TCCACCCGTG ATACGACCTA CAATCTGACG ACCGAAACCG TGGTGGAAAA AAATGGCAAC
CCGGTGCTGA TCAGTGCGGT GGTCGTTTAT CGTGTCGAAG ACACCATCAA GGCCGCTCTG
CATGTGACCG ATTACCACCG CTTTCTGGGA GATCAGGCCG GGGCCGTAGT CAAGCGGGTC
AGTTCGCTCT TCCCTTACGA ATCGAGCGAT CCCGCCATCC CGTGCCTCAA AAAAGAGAGC
GAAATTGTCA GTCAGGCTTT TGTGGCCGAA CTGCAGGATG CCGTAAATCC AGCGGGAATT
CGCGTGCTGA TGGTGCGACT CAACGATCTG ACTTACGCTC CCGAAATTGC TCAATCGATG
CTGATGCGTC AGCAGGCCAT GGCTCTGATC GATGCCCGCA AGACGATTGT CGAAGGGGCC
GTCGAAATTG TTAAAGATGC CGTAACAAGA CTGCGAGACA GCGGCTTCGA ACTCTCGGAA
TCCGACCGGG ATCAGCTCAT CTCGAACCTA CTGGTCGTGC TTTGCAGTGG CGAGCGAACT
CAACCCGTAC TCGCTGTGCA TGCCGGCGGC AGAAAACATG CTCCCGGCAC AGGCTCCTCC
ACCACCGAGT CGTGA
 
Protein sequence
MSTTQPSSRY SEPSAETAGM MELGLIIAAS VIFPPILLFG FIIVGPREEV VVLRFGKYLT 
TLRSEGIRWI HPVGRSLQRI STRDTTYNLT TETVVEKNGN PVLISAVVVY RVEDTIKAAL
HVTDYHRFLG DQAGAVVKRV SSLFPYESSD PAIPCLKKES EIVSQAFVAE LQDAVNPAGI
RVLMVRLNDL TYAPEIAQSM LMRQQAMALI DARKTIVEGA VEIVKDAVTR LRDSGFELSE
SDRDQLISNL LVVLCSGERT QPVLAVHAGG RKHAPGTGSS TTES