Gene Plim_4118 details

Gene Information

• Locus tag: Plim_4118
• ID: 9140838
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 5283933
• End bp: 5285891
• Gene Length: 1959 bp
• Protein Length: 652 aa
• Translation table: 11
• GC content: 55%
• Product: acetate/CoA ligase
• Protein accession: YP_003632128
• Protein GI: 296124350

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGAACT CTGGCAGTAT TCAAAGTACG CTCCAGGAAA CGCGAAAGTT TCTGCCTGCG 
AGTGAATTCT CGGCACAGGC ACACATTTCG AGTGAAGAGC AATATCAGTC GATGTGGCAG 
AAGGCCAAAG ACGACCCAGC CGGTTTCTGG GGAGAGCTTT CACAGGAATT GCAGTGGATC 
AAACCGTGGA CGGAAGTCAT TTCGGGAGAA ATGCCCGAAA CACGCTGGTT CACGGGAGGG 
CAGATCAACG CCTGCGAAAA CTGTGTTGAT CGACATCTCA CCAGTTGGCG GCGCAATAAG 
GCAGCGATTC TGTGGGAAGG CGAACCAGGC GACACGCGCG TGCTGACGTA CAACGATCTG 
CACCGGGAAG TGAGCAAGTT CGCGAATGTG CTCAAAAAAC TGGGTGTCAA TACGGGTGAT 
CGAGTCACGC TCTACATGCC CATGATTCCC GAACTGGCCA TTGCGATGCT GGCCTGCGCC 
AGAATTGGCG CGACTCACTC GATTATCTTT GGTGGCTTCA GTGCCGATGC GGTCGCTGAT 
CGAAACAACG ATGCTCAAGC CAAAATTATC GTGACGGCAG ATGGTGGCTG GCGGCGTGGC 
AAGGAAGTTC CACTGAAGTC GGCCGTTGAC GAAAGTCTGA CCAAGAGCCA CACCGTGCAG 
AAGGTGGTGG TCGTCCGGCG GACGGGTCAG CAGGTTCATA TGCAGACCGA CCGCGACTAC 
TGGTGGCATG ATCTGATGAG TGATGTGGAT CCGCATTGCG ATGTGGTACC ACTCGACAGT 
GAGCATCCGC TATTTATTCT GTATACCTCA GGCAGTACTG GCAAACCCAA AGGTGTAATG 
CATACGACAG CGGGTTATCT GCTGGGTACC ACCATGACCA GCCGCTGGGT CTTTGACCTG 
AAGGAAGAAG ACACTTACTG GTGTACTGCC GATATTGGCT GGATTACGGG GCATAGCTAT 
GTGGTCTACG GGCCGCTCTC GAATGGCTCG ACAGTCGTGA TGTACGAAGG AGCTCCGAAC 
TGGCCGGATG AGGGCCGCTT CTGGGAAATT ATCGAGAAGT ACCGAGTCAG TATCTTCTAC 
ACCGCACCCA CTGCCATTCG AGCCTTTATC AAGTGGGGCG ATCATTGGCC GCAAAGCCGG 
GATCTTTCGA GTTTGAGACT GCTGGGTTCG GTGGGTGAGC CCATCAATCC GGAAGCCTGG 
ATGTGGTATC ACCGCATGAT AGGTCAGGAA CGCTGCCCGA TTGTCGATAC CTGGTGGCAG 
ACCGAAACCG GAGCGATCAT GATCAGCCCG CTGCCAGGTA TCTCGGCAAC CAAACCCGGT 
AGCTGTACTC GACCGCTACC TGGTGTGGTG CCAGAGATTG TCAGTAAAGA GGGAACGCCA 
CTGGAAGCCA ACGAAGGTGG TCTGCTGGTG ATGAAGCAAC CGTGGCCCAG TATGCTGCGC 
ACGCTCTATG GGGATCATGA GCGATTCAAG CAGACTTACT TCAGCACGAT TGAAGGAGCT 
TACTTTGCCG GTGATGGGGC CCGACGTGAT GCTGATGGCG ACATCTGGGT GATGGGCCGA 
GTGGACGATG TGCTCAATGT TTCGGGGCAT CGCTTGAGTA CCATGGAAGT GGAAAGTTCA 
CTGGTGGCTC ATCCGGCAGT GGCTGAGGCG GCTGTCGTGG GCTTCCCGCA TGAAATTAAA 
GGGGAAGGGA TCTGCTGTTT TGTGACGTTG AAGACAGCTG ATTCCGAGGG TTCAGACTCA 
CTCACTGCAG ATCTGATTCA GCATGTCCGC AAGCAGATTG GTGCTCTCGC GACACCTGAC 
AAGATCCGCT ACACGGCAGC ACTTCCGAAA ACTCGCAGTG GCAAGATCAT GCGCAGGCTC 
CTGCGAGATA TTGCGGCTGG GCGGGAGTCG GTTCAGGACA CGACGACTCT GGAAGATCTC 
TCGATTCTCG CCAAGTTGCG TGATAGCGAT GACGCGTGA 

 

Protein sequence

MTNSGSIQST LQETRKFLPA SEFSAQAHIS SEEQYQSMWQ KAKDDPAGFW GELSQELQWI 
KPWTEVISGE MPETRWFTGG QINACENCVD RHLTSWRRNK AAILWEGEPG DTRVLTYNDL 
HREVSKFANV LKKLGVNTGD RVTLYMPMIP ELAIAMLACA RIGATHSIIF GGFSADAVAD 
RNNDAQAKII VTADGGWRRG KEVPLKSAVD ESLTKSHTVQ KVVVVRRTGQ QVHMQTDRDY 
WWHDLMSDVD PHCDVVPLDS EHPLFILYTS GSTGKPKGVM HTTAGYLLGT TMTSRWVFDL 
KEEDTYWCTA DIGWITGHSY VVYGPLSNGS TVVMYEGAPN WPDEGRFWEI IEKYRVSIFY 
TAPTAIRAFI KWGDHWPQSR DLSSLRLLGS VGEPINPEAW MWYHRMIGQE RCPIVDTWWQ 
TETGAIMISP LPGISATKPG SCTRPLPGVV PEIVSKEGTP LEANEGGLLV MKQPWPSMLR 
TLYGDHERFK QTYFSTIEGA YFAGDGARRD ADGDIWVMGR VDDVLNVSGH RLSTMEVESS 
LVAHPAVAEA AVVGFPHEIK GEGICCFVTL KTADSEGSDS LTADLIQHVR KQIGALATPD 
KIRYTAALPK TRSGKIMRRL LRDIAAGRES VQDTTTLEDL SILAKLRDSD DA