Gene Plim_4083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_4083 
Symbol 
ID9140803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp5238006 
End bp5239109 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content55% 
IMG OID 
Productprotein of unknown function DUF1559 
Protein accessionYP_003632093 
Protein GI296124315 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAATGC GATCCTCACA AATTCGAAAA GCCTTTACAC TCATTGAGCT CCTGGTGGTG 
ATCGCGATCA TCGCCATCCT GATTGCTTTG CTGTTGCCAG CCGTTCAGCA GGCGCGAGAA
GCGGCGCGAC GAACGCAATG TCGTAATAAC CTCAAGCAGT TCGGCCTCGC ACTGCATAAC
TATGAGAGCA CCTTTACAAT GCTCCCCATG GTGAATGCCC AGAATTACCT GCCAAATACC
CAGGGGTTCT CGCCACAAGC CCGTTTACTC CCTTACTTTG ATCAGGCTGT CCTCCAGAAT
ACTCTGGACT TTACTCAACC AGCATTTACC GGGCCATTTA GTAGCCTGGT GCCCAACCCA
AACTTTGCTG CCGCATTTGC AACTCCTCTC GCCATGTTGC TCTGCCCCAG TGATCCTGCG
CCAACCCAGA ATACTGGTGC CGGCGGTGCG ATCTATGCCG GTACGAACTA TTTCGTCAGT
TATGGTAGCG GCACAGGCAC CAACTACGAC CTTCGCTGGA AGACAGACGG CATCGTCTAT
GAAAACAGCA ATGTCCGCAT GCGCGATGTC ACTGATGGAA CGTCGAACAC CGTTTTCATG
AGTGAGTCGG TTCGTAGTAC CGGAAGTGAT GTCACATTCC CGGCGGGTAC CCTACCCCCC
TTTCCTTATC AGCTCACGAT GAATGGTTCT ACAGGTGTAG GTACGACACT CGGGACGTCT
CAAGGGATGC CTCCCACGGG TGGGGCCTGG TCATCGTTTG CCAATGCCCA GGGCTTTATC
GCAAACCCGG ATCTGAATGC GGTATGGCCT ACCATGACAA ACTGGCGAGG AGCCGCCAGT
CTGGCTCTGC GAGGCCGTGG GACCTCCTGG GCACATTCAG GAGCGATCAG TACGCTCACA
AATGGCTATA GCACACCGAA TAGCCGTATT CCTGATGTGG TGACTCACTT TACCGGCTAT
TTTGGGCCGC GCAGCTACCA CGTGGGCGGG GCGCATGCAC TCATGGGCGA TGGCACAGTA
CGTTTCCTGG GTGACAACAT TGACACCCGA ATTCATCGTG GACTTCACAG TACCAACGGT
GGTGAGGTTC TGGGTGAGTT CTAG
 
Protein sequence
MSMRSSQIRK AFTLIELLVV IAIIAILIAL LLPAVQQARE AARRTQCRNN LKQFGLALHN 
YESTFTMLPM VNAQNYLPNT QGFSPQARLL PYFDQAVLQN TLDFTQPAFT GPFSSLVPNP
NFAAAFATPL AMLLCPSDPA PTQNTGAGGA IYAGTNYFVS YGSGTGTNYD LRWKTDGIVY
ENSNVRMRDV TDGTSNTVFM SESVRSTGSD VTFPAGTLPP FPYQLTMNGS TGVGTTLGTS
QGMPPTGGAW SSFANAQGFI ANPDLNAVWP TMTNWRGAAS LALRGRGTSW AHSGAISTLT
NGYSTPNSRI PDVVTHFTGY FGPRSYHVGG AHALMGDGTV RFLGDNIDTR IHRGLHSTNG
GEVLGEF