Gene Plim_4031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_4031 
Symbol 
ID9140751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp5170095 
End bp5172503 
Gene Length2409 bp 
Protein Length802 aa 
Translation table11 
GC content56% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003632041 
Protein GI296124263 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATT ACGAAAAGCT GGGAGTGTTC TACTTAGGTC GCGAATACAA CCTGGCAAGT 
GGTCAGCTCA GCGATACTCC CGTCCTGTAC GACTCCAAGG ATCTCACCAC CCATGCCCTC
TGCGTGGGGA TGACAGGGAG CGGCAAAACG GGCCTGTGCC TGTCACTTCT GGAAGAAGCG
GCCATCGATG GCCTCCCTGC CATCTGTATT GATCCCAAAG GCGATCTGGG GAATCTCCTC
CTGACGTTTC CATCTCTTAA ACCGGCCGAT TTCAAACCCT GGATCGATCC CGGCGAAGCG
ACTCGCAAAG GGCTCACGGT CGATGAACTT GCAGCCAAAA CCGCCACACA GTGGAAAGAG
GGCCTCGCAG CCTGGGATCA GCCTCCCGAG CGAATTGCCC GTTTCCGCGA ATCGGCCGAT
GTCTGCATCT ACACTCCCGG CAGCACTGTC GGGGTCCCAC TGACAATTCT CAAATCCCTC
TCGGCTCCGC CTCCCGTCAT TCGCGATAAC GCCGAGGCCT TTCGCGAAAG GATTGGAAGT
GCAGTTTCAG GACTGCTCGC TCTCTTGGGT GTCGATGCTG ATCCACTCCG CAGCAGAGAA
CACATTCTCC TTTCAACACT TGTCGAACGA TCATGGCGCG AGGGGCAGAA TCTCGAATTG
GGCCGCCTGA TTCGCGATAT CCAGCAGCCC CCCTTTGATC GAGTTGGCTT TCTCGATCTG
GAAAGTTTCT TCCCCGCCAA AGACCGATTC TCGTTTGCGA TGTCGCTCAA CAACCTACTC
GCTTCGCCCG GGTTTCAAGC CTGGATGACT GGCGAACCAC TCGATATCCA AAGACTGCTC
TATACACCAG AAGGCAAACC CCGCATTGCG ATCCTGTCGA TCGCTCATTT GAGTGATGCC
GAGCGCATGT TCTTCGTCAC GATCCTGCTC GGTGAAGTCA TCAGCTGGAT GCGTGCTCAA
TCGGGAACGA CAGCACTTCG AGCGTTGCTC TACATGGATG AAATCTTCGG CTACTTCCCG
CCCAGTGCCA ACCCACCCAG CAAACAGCCC ATGCTCACGC TACTCAAGCA GGCTCGCGCC
TTTGGTCTGG GTTGTGTCCT GGCAACGCAG AATCCTGTCG ATCTCGATTA CAAGGGCCTC
TCCAATTGTG GGACCTGGCT GATCGGTCGT TTACAAACCG AGCGCGATAA ACTCCGTGTG
CTCGATGGTC TCGAAGGAGC CTCGACAGCC ACTGGCCATG CCTTTGATCG CAGTTCGATG
GAGAAACTCC TGTCTTCGCT CGGCAGCCGG GTGTTTCTCA TGAACAATGT CCACGATGAT
CAGCCCACAG TCTTCCAGTC GCGCTGGGCC CTTTCCTACC TGCGGGGGCC ACTCAGTCGA
GAGCAGATTC AACTGCTGAT GGACGAACGC AAATCGCAAA TGCCCGAGGA TCACACCGCT
TCGACCTGGC ATGCGGATGC TGCGACAGGA ACCAGACCTG TCCTTCCGCC CGAAGTTTCG
GAAGTCTTCA TCGAGCGGTC GGGGGCTCTC TCGACGGGCG AGAACCTGAT CTATCATCCC
GCGCTCTACG CCACAGCCCG TATGCACTTT ACACAGACAA CAGGTGGGAT CGACGAATGG
CAGACAGTTT CTCTCCTGTT GCCAGCCCAC GAAGGTGAGG CTCTCAACTG GGAAGCGGCC
GAAGAACTCG AAGGGGAGTT AACCCTTGCC AGCAGCCCTG ACGCCAATGC CACCTTTACT
CAGCCTCCTG CTGAACTCTT TCGAGCGAAG ACGTACACTT CTCAGGCGAC AGCTCTGAAA
GATTGCCTTT ATCGATCCCG TAAACTTTCC CTCTTCAAAT GTGCTGATCC CAAAGGGATC
TCGCTGCCGG GCGAATCAGA AGGCGATTTC CGCCAGAGAC TGGATCAGGG ACATCGCGAT
CAAAGGGAAC TGGCCAAGGC CAAAATTCAG GCCAAATATC AGTCCAAGCT GCAGACCCTC
GAAGATCGAC TGCGACGAGC CGAGCAGACG GCTGAAAAGC AGAAAAGTCA GGCGAACTCC
CAGACACTTT CCGCTGTCAT CAGTTTTGGA ACATCACTGT TAGGGGCCTT TACCAGCCGG
AAAAAGATCT CGACGACGAA CCTTTCCAGA GCAGCGACAT CAGCCCGTGC TGCCTCTCGG
GTTCTGGAAG AACGGGGTGA TGTCGGCCGA GCCGAAGAAA CCGTCGGGGC CGTCCGTTCA
CAGATTCAGA AGCTGCAGGA CGACTTCCAG CACGAGATTG ATGAAATCGT CGGACTCGAC
CCTTCTCGAT ATGTGCTGGA AGAAACGCAA CTCACGCCCA AGAAGACCGA TATGAAGGTC
GAGCGGATGA TCCTCGCCTG GGTCCCCTTC AAGCAGGATC GCTCTGGCAA AGTGATCCCC
ATCTGGTGA
 
Protein sequence
MSDYEKLGVF YLGREYNLAS GQLSDTPVLY DSKDLTTHAL CVGMTGSGKT GLCLSLLEEA 
AIDGLPAICI DPKGDLGNLL LTFPSLKPAD FKPWIDPGEA TRKGLTVDEL AAKTATQWKE
GLAAWDQPPE RIARFRESAD VCIYTPGSTV GVPLTILKSL SAPPPVIRDN AEAFRERIGS
AVSGLLALLG VDADPLRSRE HILLSTLVER SWREGQNLEL GRLIRDIQQP PFDRVGFLDL
ESFFPAKDRF SFAMSLNNLL ASPGFQAWMT GEPLDIQRLL YTPEGKPRIA ILSIAHLSDA
ERMFFVTILL GEVISWMRAQ SGTTALRALL YMDEIFGYFP PSANPPSKQP MLTLLKQARA
FGLGCVLATQ NPVDLDYKGL SNCGTWLIGR LQTERDKLRV LDGLEGASTA TGHAFDRSSM
EKLLSSLGSR VFLMNNVHDD QPTVFQSRWA LSYLRGPLSR EQIQLLMDER KSQMPEDHTA
STWHADAATG TRPVLPPEVS EVFIERSGAL STGENLIYHP ALYATARMHF TQTTGGIDEW
QTVSLLLPAH EGEALNWEAA EELEGELTLA SSPDANATFT QPPAELFRAK TYTSQATALK
DCLYRSRKLS LFKCADPKGI SLPGESEGDF RQRLDQGHRD QRELAKAKIQ AKYQSKLQTL
EDRLRRAEQT AEKQKSQANS QTLSAVISFG TSLLGAFTSR KKISTTNLSR AATSARAASR
VLEERGDVGR AEETVGAVRS QIQKLQDDFQ HEIDEIVGLD PSRYVLEETQ LTPKKTDMKV
ERMILAWVPF KQDRSGKVIP IW