| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_4028 |
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| Symbol | |
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| ID | 9140748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 5166756 |
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| End bp | 5167934 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase |
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| Protein accession | YP_003632038 |
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| Protein GI | 296124260 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGGATACG GCATGTCGAA AGAGCGTGTA GTCCTCGCGA TGAGTGGCGG AGTGGATAGC
TCTGTGGCTG CCGTTCTGCT GCAGCAGCAA GGCTACGAGG TCATCGGCCT CTTCATGCGT
TCTGGTGAAG CCAGTGCCAG CGCCTGCTCA CTCCCTCCCA GTGGCCTGCT GCCTGTTATT
GAGCGAAAAT CTCATAAGCA GGGATGTTGC AGTGCGGCTG ATGCAGCGGA CGCCCAGCGT
GTGGCCGATC TGCTGGATAT TCCCTTCCAT GCCCTCAATT TTCGTGATTC GTTCGATCAG
ATCAAATCGT ACTTTGCGGA TGAATATCTC AAGGGCCGCA CGCCCAACCC GTGTGTCATG
TGCAATGTCT GGCTGAAGTT TGGCCGGTTG TGGGAGTTTG CCCAGCAGGT CGGTGCGACG
CGTATTGCTA CGGGGCATTA TGCCCGCATC ATTCAAGATG AATTCGGGCA GACCCGGTTG
ATGCGGGGAG CTGATCTTTC CAAAGATCAA TCGTATGTGC TCTTCGGGAT TCGCCCGGAC
ATTCTTTCCA AGATTCTCTT CCCTGTCGGT CATCAACCCA AAGCCGAAAT TCGTGAGATT
GCAGCACAGG CCAATCTGCG AGTTGCTGGT AAACCCGACA GCCAGGAGAT CTGCTTCATT
CCTGACAACG ATTATCGCGG GTTTCTCCGG CGATATCGCG ACGTGAGTGA CACTTCCGGG
AATTTCGTGG ATCCACAAGG GAAGATCCTG GGGCAGCACA GTGGGTTTGA GCAGTTCACG
ATTGGTCAAC GCCGTGGGCT GGGAATTGCC CTGGGTGAGC CCCGGTTTGT AATCAAGATC
GATGCGGAAT CGAGGAATGT CACACTCGGA ACCGCCGAAG AGCTGGGTTC GTCCTCACTA
GTGGCAGCAC GCACCAACTG GCTATCGGCT CCCACGAGCG AAGTTTTTTC CTGCACTGCT
CAGATTCGAT CGATGCATCG GGCGGCGGCA GCATGGGCAC AGGTGGATGC GGATGGAACA
TTGCATCTTC GTTTTTGCGA GCCTCAATCG GGAGTAGCAC CCGGGCAAGC GGTCGTGCTC
TATGATTCGC TGGAACGAGT GATCTGCGGT GCGTGGATTG AAGACTCTCA ACCACCACGA
GCCGATGCTC TGGCTATGGT CGATTCTCAC GCTTGCTGA
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| Protein sequence | MGYGMSKERV VLAMSGGVDS SVAAVLLQQQ GYEVIGLFMR SGEASASACS LPPSGLLPVI
ERKSHKQGCC SAADAADAQR VADLLDIPFH ALNFRDSFDQ IKSYFADEYL KGRTPNPCVM
CNVWLKFGRL WEFAQQVGAT RIATGHYARI IQDEFGQTRL MRGADLSKDQ SYVLFGIRPD
ILSKILFPVG HQPKAEIREI AAQANLRVAG KPDSQEICFI PDNDYRGFLR RYRDVSDTSG
NFVDPQGKIL GQHSGFEQFT IGQRRGLGIA LGEPRFVIKI DAESRNVTLG TAEELGSSSL
VAARTNWLSA PTSEVFSCTA QIRSMHRAAA AWAQVDADGT LHLRFCEPQS GVAPGQAVVL
YDSLERVICG AWIEDSQPPR ADALAMVDSH AC
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