| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_4027 |
|---|
| Symbol | |
|---|
| ID | 9140747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 5165016 |
|---|
| End bp | 5166485 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | UTP--glucose-1-phosphate uridylyltransferase |
|---|
| Protein accession | YP_003632037 |
|---|
| Protein GI | 296124259 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.355628 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCGGC CTTTCCCTGC TGATGCAGAA CACAAAGAGA TTGAACAAGC GCGCGGTTTG
CTGGTCGAGG CGGGGTACGG CAAACTCGCG GGTTGGCTCC AGACGTTGCC TGCTCTCAGC
CGGTCGAAGC TTGCCAGAGA AATCGTGGCC ATTGACTGGC CACTACTCAA ACATGCTGTG
GCTGCAAAGC AAATCACAAC GGCCCCTGCG AATGGAGCGA ATTCTCCAGC CTCGCGAGCT
GTCGCGCCGG AGCAATTGAT CCGCCAGCCG AAGGACTCGA ACGATTTTTC GGCTTGGCGC
ACTGCTGCGG AACGTGGCCG CGACCTGCTC AAAAAGGGGC AGGTTGTGCT GATGGTGGTG
GCTGGTGGAC AAGGCACACG ACTGGGCTTT TCGCATCCGA AGGGGCAGTA TCCGATTGGT
CCTGTCAGCC AGGCCTCGCT TTTTCAGATT TTCTGCGAGC AGATTCGAGC ACTCGAGAAA
GAAGTCGGGG TTGTTTTGCC CTATTGCCTG ATGACCAGTG ATTCGACGCA CGAAGCGACG
ATGCGTTTTT TTGAGACCAA TGAGTTTTTT GGTTTGTCGA AGGAACAGGT GCATTTCTTT
AAGCAGGGGA ATCTTCCGGC ACTCGATAGC CGGACTGGTG AACCGCTATT GGCGACTGCG
GATTCACTGG CGATGAGTCC GGATGGGCAC GGCGGCATGT TGCGTGCCTT CCGGGAAAGT
GGGCTGCTCG ACAAGTTCCT CTCGGAAGGT CGTACCACGC TTTACTATCA TCAGATCGAC
AATCCTGCAG CGATTCTGGC TGAACCGGCG TTTCTGGGTT GGCATGCCCG ATATGACTCA
CAAGTCTCGA CTAAAGTGGT GGCTAAGACC AGTGCCAGTG AGCGGATGGG TGTGGTGGTC
TCGATTGATG GTGCCACACA GATCATCGAA TACAGCGATA TGCCGGCCGA ACTGGCCCAG
CGAGTGGATG CCCGCGGACA GTTGCAGTTA TGGGCCGGAA ATACGGCCAT CCATCTATTC
GACCTGGCCT TTCTGAAAGG TCTGGATGGC GATCGTGCTT TGCCACTGCA TGTGGCCCAC
AAGCCTGTTG GCTGTTTTGA TATCGAGAGC CGACAGATGA TTTCGACAGC CGAGCCGAAT
GCCTGGAAAT TTGAGCGATT CATTTTCGAT ACACTGCCGT TGGCGAAGAG TTCACTCGTG
GTGGAAGCCG ATCGGTCTCG CGAGTTTCTG CCAGTCAAGA ATCGCGATGG GGCAGATTCA
CCCGCTTCTG TGAGGCAAGC CTTACTCGAC CTCCATCGAA GCTGGCTGCT GCAGGCGGGT
GCGAAGGTTT CCCCAGGTGT GAAAGTGGAA ATCAGCCCGC TGGTGGCCCG CGACCTGGAG
ACTTTGGCCG GTAAACTCTC ACCCGGTATC GAGTTCCATC AGGATGTCTA TCTTGATGAG
AAGTTTCTGC AGTCGCTCAA GCGGGCCTGA
|
|---|
| Protein sequence | MTRPFPADAE HKEIEQARGL LVEAGYGKLA GWLQTLPALS RSKLAREIVA IDWPLLKHAV
AAKQITTAPA NGANSPASRA VAPEQLIRQP KDSNDFSAWR TAAERGRDLL KKGQVVLMVV
AGGQGTRLGF SHPKGQYPIG PVSQASLFQI FCEQIRALEK EVGVVLPYCL MTSDSTHEAT
MRFFETNEFF GLSKEQVHFF KQGNLPALDS RTGEPLLATA DSLAMSPDGH GGMLRAFRES
GLLDKFLSEG RTTLYYHQID NPAAILAEPA FLGWHARYDS QVSTKVVAKT SASERMGVVV
SIDGATQIIE YSDMPAELAQ RVDARGQLQL WAGNTAIHLF DLAFLKGLDG DRALPLHVAH
KPVGCFDIES RQMISTAEPN AWKFERFIFD TLPLAKSSLV VEADRSREFL PVKNRDGADS
PASVRQALLD LHRSWLLQAG AKVSPGVKVE ISPLVARDLE TLAGKLSPGI EFHQDVYLDE
KFLQSLKRA
|
|---|
| |