| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_4023 |
|---|
| Symbol | |
|---|
| ID | 9140743 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 5162346 |
|---|
| End bp | 5162993 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | putative pyridoxamine-phosphate oxidase |
|---|
| Protein accession | YP_003632033 |
|---|
| Protein GI | 296124255 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.323622 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGAGG TTCGTGAGTC CCATGCCTGG GTGTGGGATC AACTCTGGAT CCGACTGCTG
GCAGCCGTCG AAAATCGACA GTCACCGTGG CGAACACCCG TACTGGCGAC ACTGGATGGG
GCGACACTGG ATGGGGCCAC ACTGGATGGG GCGACTTTGG ATGGTCACTG GCCAGCGGCT
CGAACTGTGA TCCTCAGAGA CGTGATGCCC CAAAGTCGTC AACTCGTGGC CCATGTCGAT
CGGCGATCTC CCAAGATCAA CCAGTTGCAG TGGAATCCTC ACGCATCCTG GACGTTCTAC
GACCCTGCCG CTGCGATTCA ATTACGCATC ATGTCCCAGA TCTCTCTGCA TACAGAAGAC
GAACTGGCGA GTTCCCAATG GTCGAAAACG CCTGCTTCCA GCCGCAAAAG CTATCTTTCG
ACCGAGGCTC CCGGTGCTCC ACTTCCCGGG CCTATCAGCA CCTTGCCGGC TGAACTTCGA
GGCCGAGAAC TGACAGAGCA AGAACTACTC GCTGGCCGAC CAAACTTTTG TGTGCTACTC
GCTCAAGTGT TGGAAGTCGA CTGGTATGAC CTGCATCCCG CAGGACACCT GCGACTCAAG
TTCGACTGCC GGGCTGAACA GGTCGATCAT CAGTGGATCG CGACGTGA
|
|---|
| Protein sequence | MQEVRESHAW VWDQLWIRLL AAVENRQSPW RTPVLATLDG ATLDGATLDG ATLDGHWPAA
RTVILRDVMP QSRQLVAHVD RRSPKINQLQ WNPHASWTFY DPAAAIQLRI MSQISLHTED
ELASSQWSKT PASSRKSYLS TEAPGAPLPG PISTLPAELR GRELTEQELL AGRPNFCVLL
AQVLEVDWYD LHPAGHLRLK FDCRAEQVDH QWIAT
|
|---|
| |