| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_4004 |
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| Symbol | |
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| ID | 9140724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 5141232 |
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| End bp | 5143151 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | ABC transporter related protein |
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| Protein accession | YP_003632014 |
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| Protein GI | 296124236 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.774502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCAGCTC CTTCTGGTCT TTGCCAGCTT GATCACGTTT CGGCCCTGGC GAGAACTGTT
CGGCCCAGTG CCCGTCGTGA GCGGCTGGAG ACGATCACCA CGACCATACC CTGTGGTCTG
ACAGCCGTCA TGGGGCCATC GGGAGCTGGG AAGACGACGC TATTGAATCT GCTGGCTGGC
TTCGAAGAGC CGAGTTCCGG GAAGCTCCAG TGGAACCATA CGGCTTACAA TCAAGCAATC
CATGAACCCT TGACTTTGCC CATCGCCTGG ATGCCTGCCG ATTTCGGCCT CTGGCCCGAT
CTGACGATTG CCGAGCATTT GCAGGCCACA GCCCCAGTTG GTTCAAGCCA GGCACAGGTG
GAAGACTGGA TTTCATTGTT TGAACTGCAC CCCGCACATC GGTTGCCCAG CCAGCTCTCG
CAAGGCGAAC AATCCCGGCT GAGCCTGGCG CGAGCCGTCA TTTCGAATGC ACCGGTGCTT
GTCCTCGATG AGCCTTGCGT TCATCTGCAG GCAAGTTTGA CGCAAACACT CTGGAAGAGT
TTGACTCGTT ACTGGAAGGA GCAACAGACG AACGTGATCT ACAGCACTCA CCAGCCGGAA
CTCGTGCTGG GATGTGCCAA TCATCTATTG ATCCTCGAAG ATGGAAAACT GGTGGCCAGT
GGTCGGCCTG TCGATCTTTA TCGATCACCC GAGACACAGG AAGTGGCGTG GATTCTCGGG
GCGACCAATT GGTTTTTGAC GAACGAGCAA GCACTCTGGT GGGGTGAAGA GTTGCCGCAT
GCGAATGTGC GTCCCGAACA GGTGGAGGTA CTGGCTGCGA GCGAGTCTTC GATCGTGATG
GAGAGTCTGG AGACCGTCGG GCCGCTCTCT GTACTGGAAC TGCGTGCTCT TCGAGAGCAG
GCAGCCCAAC CTGATGCCCG CGAAATGGAA GTTGGCCCAA AAACATCACG AACTCTGTGG
GTTGCCGGGC AGCGAAGTTT TCCACCGGTT GGGAGCCGTG TGAGATTGCG GTGGCTGCCA
CTGCTGCTCT TCATTGCGCT GCTGCTCAAC TTATCCGGTT GCTGGAAAGC TGATGAACCC
CGGGTGGCCA TCGCAGAGGA AACGCGCTGG ATGCTCCCGG CTGATGGGCC ACTTGTCCCG
GCACCGCGCG GATTGTGTGT TTCTCCCGCT GGTGAATTGC TGGTGCTCGA CACCGCTGGC
CGTGTGCTCA TTTATGACCG CGAGCATCAG CTCGTGCGGA AGTGGCATAT GCCTGAGTAT
TCCATCGGGA AAGCCGAAGG GATCTGTGTG CTGAATGACG GGCGGATTGC CGTCGCCGAT
ACACATTATC ATCGCGTGGT GATTTTTCAT CCCGATGGGA CGATCAGCCA TATCTTTGGG
CAGGAAGGAA AAGGGCCAGC AGAGTTCATT TATCCGGTCG CGATTACACA AGACCCGGAA
GGCTTTCTCT ATGTTTGCGA GTATGGCTCG AATGATCGCT GCCAGAAGCT GACGACCGAT
GGTCAGATGG TGCTGGAAAT GGGGCGATTT GGTCTGGGGC CGGGAGAATT TCAAAGGCCC
AGCGGTGTCG TCTGGTCGGA GGGCCGACTC TACATTGTCG ATGCTTTCAA CAGCCGGGTG
CAGGTTTTTG ATGCACAGAC GGGGAAGCTC TTGCAAAATG ATTTCAACCA GGCCGAACTG
GCTTATCCTT ATGACATTGC ATCAGGTTCA ACGGAGGCAG GAAAAGCGAT TGATTTCTGG
ATTGTCGAGT ATGCGAGCGG GCAGGTGACG AGGCTTTCCG CGAATGGTGA ACTTATGGGA
CGAGGTTTTG CTGCCGAACC ACTGCGGACT CCCTGGGGAG TGTGTTACGA TCCTGAGGGA
AGGCTGTATG TGGCCGATAC GGGGAATCGC CGGATTGTCT GCTGGAAAAT TTCTCGTTGA
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| Protein sequence | MSAPSGLCQL DHVSALARTV RPSARRERLE TITTTIPCGL TAVMGPSGAG KTTLLNLLAG
FEEPSSGKLQ WNHTAYNQAI HEPLTLPIAW MPADFGLWPD LTIAEHLQAT APVGSSQAQV
EDWISLFELH PAHRLPSQLS QGEQSRLSLA RAVISNAPVL VLDEPCVHLQ ASLTQTLWKS
LTRYWKEQQT NVIYSTHQPE LVLGCANHLL ILEDGKLVAS GRPVDLYRSP ETQEVAWILG
ATNWFLTNEQ ALWWGEELPH ANVRPEQVEV LAASESSIVM ESLETVGPLS VLELRALREQ
AAQPDAREME VGPKTSRTLW VAGQRSFPPV GSRVRLRWLP LLLFIALLLN LSGCWKADEP
RVAIAEETRW MLPADGPLVP APRGLCVSPA GELLVLDTAG RVLIYDREHQ LVRKWHMPEY
SIGKAEGICV LNDGRIAVAD THYHRVVIFH PDGTISHIFG QEGKGPAEFI YPVAITQDPE
GFLYVCEYGS NDRCQKLTTD GQMVLEMGRF GLGPGEFQRP SGVVWSEGRL YIVDAFNSRV
QVFDAQTGKL LQNDFNQAEL AYPYDIASGS TEAGKAIDFW IVEYASGQVT RLSANGELMG
RGFAAEPLRT PWGVCYDPEG RLYVADTGNR RIVCWKISR
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