Gene Plim_3985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3985 
Symbol 
ID9140705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp5114833 
End bp5116266 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content56% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003631995 
Protein GI296124217 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.392216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGACC ATTCACACTC TGAAACAAAC CCAGTGACAT CTACTCCCCA TGACGAAGCT 
TCTCCCGGTA CGGGTGAAGC AGCGGTTCGG GGTGTGGCAC CGGCGGCTGA TCCCAAACAA
CCCGTCGCCT ATGTCCTGGC CGAATATTCG ACACCAGAAG CACTGGTGAA AGCTGCCCGT
CAGGTCTATC AGCAGGGCTA CACGAAGTTC GATGCCCACT CGCCCTTCCC GATTCACGGG
ATCGACGACG CCATGGGGAT CAAGTTCACT CGCCTGCCCT GGTTTACCTT CGTTGCCGGT
GGCCTGGGGA TTATCACCGC CACCCTGCTG ATCTATTACA CGAACAAAGA GTGGTACCCT
TACCTGATCA GCGGTAAGCC GCTCTTTTCG ATTCCGTCTG CTGCACCTGT GATGTTCGAA
TTGATGGTGC TCTTTGCAGC CATCACGACA TTGCTCGGCA TGCTGGCACT CAATCGCCTC
CCGCTTTTCA CTCATCCGCT GTTTCAGAGC ACTCGCTTCC AGCGTGTGAC CAACGATAAG
TTCTTCCTCA GCATTGACGC TCGCGATCCG AAGTACAAAA GCGAAAAGAC GATTCAACTG
CTGACTGGCC TGGGTGCTGA ATACGTCGAG ACTTGCCATA AAGAAGCTTC CGCCCCACTG
CCGTGGGCAT TCCGTACAGC CGTCTTTCTG GGCCTGCTGC TCGCCATGGT CCCTGTTTCG
ATGGTCGCCT GGAAGCGTTC GACCTATTCG CGTGAACCAC GCATTCGTGT GATCTTCGAT
ATGGTTTCGC AGCCCAAGAA GAAAACACAG ACCACCTCGA CATTGTGGCA GGATGGTCGG
GCCATGCGTC CGTGGGTGGA AGGAACCATC GCTAAAGGTG AGCTGAAGGC TGATGATGCT
TTCTACCGCG GCTTGAAACC AGGCGGTCTC AATGCAGTGG CGGCCACGAC CGTCTCGATG
ACCAATCTGG TTGCCAATCA GGACGGTGCT GCAGCAGCAG CCACACCAGG CGCTCCCGCG
ACACCTCCTG ATCCTCTCGA CAAGTTGCCC TGGATTGAGA ACTTCCCTCT GGAAGTCACA
CCCGAGCTGA TGAAACGTGG TCAGGAGCGT TACAACATTT ACTGCGCGAC ATGTCACGGC
CTGGGTGGCG TAGGTAATGG ACTGGTCACA ATCCGCGCGA TTGAACTGGC CGAAGGGACC
TGGGTTCCGC CCGTCACCTT CCATTCCGAA GGTTTACGTA AACAACCCAT CGGGCGCATG
TTCCACTCGA TCAGCAACGG TGTCCGCAAG ATGCCTGGCT ATGGTGATCA AATTCCGGAA
CGTGACCGCT GGGCGATCCT GCTGTATGTC CGGGCGCTGC AGAAGAGTAA ATATGCTCCT
CTGTCCGATG TTCCACCAGA AAAGGTGAAT CAACTGACAG ACGTCGCTCC CTGA
 
Protein sequence
MADHSHSETN PVTSTPHDEA SPGTGEAAVR GVAPAADPKQ PVAYVLAEYS TPEALVKAAR 
QVYQQGYTKF DAHSPFPIHG IDDAMGIKFT RLPWFTFVAG GLGIITATLL IYYTNKEWYP
YLISGKPLFS IPSAAPVMFE LMVLFAAITT LLGMLALNRL PLFTHPLFQS TRFQRVTNDK
FFLSIDARDP KYKSEKTIQL LTGLGAEYVE TCHKEASAPL PWAFRTAVFL GLLLAMVPVS
MVAWKRSTYS REPRIRVIFD MVSQPKKKTQ TTSTLWQDGR AMRPWVEGTI AKGELKADDA
FYRGLKPGGL NAVAATTVSM TNLVANQDGA AAAATPGAPA TPPDPLDKLP WIENFPLEVT
PELMKRGQER YNIYCATCHG LGGVGNGLVT IRAIELAEGT WVPPVTFHSE GLRKQPIGRM
FHSISNGVRK MPGYGDQIPE RDRWAILLYV RALQKSKYAP LSDVPPEKVN QLTDVAP