Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3985 |
Symbol | |
ID | 9140705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 5114833 |
End bp | 5116266 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003631995 |
Protein GI | 296124217 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.392216 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGACC ATTCACACTC TGAAACAAAC CCAGTGACAT CTACTCCCCA TGACGAAGCT TCTCCCGGTA CGGGTGAAGC AGCGGTTCGG GGTGTGGCAC CGGCGGCTGA TCCCAAACAA CCCGTCGCCT ATGTCCTGGC CGAATATTCG ACACCAGAAG CACTGGTGAA AGCTGCCCGT CAGGTCTATC AGCAGGGCTA CACGAAGTTC GATGCCCACT CGCCCTTCCC GATTCACGGG ATCGACGACG CCATGGGGAT CAAGTTCACT CGCCTGCCCT GGTTTACCTT CGTTGCCGGT GGCCTGGGGA TTATCACCGC CACCCTGCTG ATCTATTACA CGAACAAAGA GTGGTACCCT TACCTGATCA GCGGTAAGCC GCTCTTTTCG ATTCCGTCTG CTGCACCTGT GATGTTCGAA TTGATGGTGC TCTTTGCAGC CATCACGACA TTGCTCGGCA TGCTGGCACT CAATCGCCTC CCGCTTTTCA CTCATCCGCT GTTTCAGAGC ACTCGCTTCC AGCGTGTGAC CAACGATAAG TTCTTCCTCA GCATTGACGC TCGCGATCCG AAGTACAAAA GCGAAAAGAC GATTCAACTG CTGACTGGCC TGGGTGCTGA ATACGTCGAG ACTTGCCATA AAGAAGCTTC CGCCCCACTG CCGTGGGCAT TCCGTACAGC CGTCTTTCTG GGCCTGCTGC TCGCCATGGT CCCTGTTTCG ATGGTCGCCT GGAAGCGTTC GACCTATTCG CGTGAACCAC GCATTCGTGT GATCTTCGAT ATGGTTTCGC AGCCCAAGAA GAAAACACAG ACCACCTCGA CATTGTGGCA GGATGGTCGG GCCATGCGTC CGTGGGTGGA AGGAACCATC GCTAAAGGTG AGCTGAAGGC TGATGATGCT TTCTACCGCG GCTTGAAACC AGGCGGTCTC AATGCAGTGG CGGCCACGAC CGTCTCGATG ACCAATCTGG TTGCCAATCA GGACGGTGCT GCAGCAGCAG CCACACCAGG CGCTCCCGCG ACACCTCCTG ATCCTCTCGA CAAGTTGCCC TGGATTGAGA ACTTCCCTCT GGAAGTCACA CCCGAGCTGA TGAAACGTGG TCAGGAGCGT TACAACATTT ACTGCGCGAC ATGTCACGGC CTGGGTGGCG TAGGTAATGG ACTGGTCACA ATCCGCGCGA TTGAACTGGC CGAAGGGACC TGGGTTCCGC CCGTCACCTT CCATTCCGAA GGTTTACGTA AACAACCCAT CGGGCGCATG TTCCACTCGA TCAGCAACGG TGTCCGCAAG ATGCCTGGCT ATGGTGATCA AATTCCGGAA CGTGACCGCT GGGCGATCCT GCTGTATGTC CGGGCGCTGC AGAAGAGTAA ATATGCTCCT CTGTCCGATG TTCCACCAGA AAAGGTGAAT CAACTGACAG ACGTCGCTCC CTGA
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Protein sequence | MADHSHSETN PVTSTPHDEA SPGTGEAAVR GVAPAADPKQ PVAYVLAEYS TPEALVKAAR QVYQQGYTKF DAHSPFPIHG IDDAMGIKFT RLPWFTFVAG GLGIITATLL IYYTNKEWYP YLISGKPLFS IPSAAPVMFE LMVLFAAITT LLGMLALNRL PLFTHPLFQS TRFQRVTNDK FFLSIDARDP KYKSEKTIQL LTGLGAEYVE TCHKEASAPL PWAFRTAVFL GLLLAMVPVS MVAWKRSTYS REPRIRVIFD MVSQPKKKTQ TTSTLWQDGR AMRPWVEGTI AKGELKADDA FYRGLKPGGL NAVAATTVSM TNLVANQDGA AAAATPGAPA TPPDPLDKLP WIENFPLEVT PELMKRGQER YNIYCATCHG LGGVGNGLVT IRAIELAEGT WVPPVTFHSE GLRKQPIGRM FHSISNGVRK MPGYGDQIPE RDRWAILLYV RALQKSKYAP LSDVPPEKVN QLTDVAP
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