Gene Plim_3978 details

Gene Information

• Locus tag: Plim_3978
• ID: 9140698
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 5102513
• End bp: 5103274
• Gene Length: 762 bp
• Protein Length: 253 aa
• Translation table: 11
• GC content: 54%
• Product: protein of unknown function DUF374
• Protein accession: YP_003631988
• Protein GI: 296124210

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGATCC AAAGCCCATT TTTGATTCGC TGTGGTGCAT GGTTCGCCAT CAGCACCATG 
CGACTGATTA TCTCCACCTG CCGTCTCGAG TATCGCTCGC CAGATCCCAA AACACGACTC 
GATTGTCCTT TTGGCCCTGA TGTACCCGAG AGGTATGTCG TCCCTGTCTG GCACGACTTG 
CTCTTGTTCC CGACCTTCAC CGCCCGTCGG AGCGACCTCT GCTGCGGTCT TGTCAGCCGG 
CATGATGGCG CTTCATTTCT TTCCACCGCC ATTGAAATGC TCGGCGGCAA GGCCATTCGT 
GGCTCGAGCC GTAAAGGAGC AACGTCGGCT CTCAAGCAGA TGCTCACCCA GACGGATGGC 
TATCACATTC TGATTACGCC CGATGGCCCG ATGGGGCCAC GTCGTCAGAT GAAACAGGGA 
GCCATTTTCA TGGCTTCTAA CCTGCAAAGG CGGATTGTCC CCACAGCTTA CTGGGCTTCC 
AGAGTCTGGC GGATTAAAGG CTCGTGGACA GATATAGTCA TCCCCAAGCC CTTCTCGAAA 
ATCATTATTG TCTCAGGCGA AGCGATCTCT ATCCCCCCGG AACTTTCACG AGAAGATATC 
ACTTATTGGA CCAATCATCT GCAGCAGGCC ATGGATCAAC TCCATGCGGA ACTCGAAGCT 
TCTACGACGA CAGCGAAGTC TTCGAAAATA GAGGCTGAAC AAACAGCATG TTCAGCCTCC 
CCACAGCTTC AGATATCAGG TTCCGAGCGT CACGCCGCCT GA 

 

Protein sequence

MKIQSPFLIR CGAWFAISTM RLIISTCRLE YRSPDPKTRL DCPFGPDVPE RYVVPVWHDL 
LLFPTFTARR SDLCCGLVSR HDGASFLSTA IEMLGGKAIR GSSRKGATSA LKQMLTQTDG 
YHILITPDGP MGPRRQMKQG AIFMASNLQR RIVPTAYWAS RVWRIKGSWT DIVIPKPFSK 
IIIVSGEAIS IPPELSREDI TYWTNHLQQA MDQLHAELEA STTTAKSSKI EAEQTACSAS 
PQLQISGSER HAA