Gene Plim_3933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3933 
Symbol 
ID9140651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand- 
Start bp5052164 
End bp5052817 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content48% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003631943 
Protein GI296124165 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTCA AAAGTCGCCT TTTCACACGT CCTTTACTGT TTATGGCGGC TGTTGTTTCT 
ATCGTTCTCG CTGGGTTATT AGTCCAGAAT ATACTCAATC ATCGCAAGGC GATTGATAAT 
ACATATCGAA GAGGTATGAT CGCGCAGATT CGATTTGCTT TAATGCGATA CAGAGATGTT 
TATGGGGTGT TGCCTCCCCT GAGTACTAAC CCAAAAGATG GAGGGGAAGG GCTGAGTTGG 
CGAGTTCTGA TTCTTCCGTT TTTAGGGGAG CGGGAACTGT ATTCGCAGTT TGACCTTTCT 
CACTCGTGGG ACAGCCAGAT TAATCGTGCC CTTGTCGATA AAATGCCAGA GCGTCTTTTC 
AAGTTTGTAA AGCAAGATGG TGGAGGCAAG ACTCGTTACG CTGCCTTGTC ACGCAACGGC 
GACTGGGGAG TAGATCCTAC GTGGGACGGC AGATCAAGGC CCTCTCCCAA TCCGATTTTT 
CTAGTTGAGT CAGCGGAGCC GATCATCTGG ACTCGGCCGC AAGACATTAC TGTGCCCACC 
AGCGGGGTAG AAAAGGAAAA ATCTATTGTT CGCTCAATTT CAGGTGATCC GCCGTTTGGG 
GTTGGTCCAT GGGGAGGCAT TGTAAAACTC AAGGTTGGAG ACTGTTTCGA GTAA
 
Protein sequence
MNFKSRLFTR PLLFMAAVVS IVLAGLLVQN ILNHRKAIDN TYRRGMIAQI RFALMRYRDV 
YGVLPPLSTN PKDGGEGLSW RVLILPFLGE RELYSQFDLS HSWDSQINRA LVDKMPERLF 
KFVKQDGGGK TRYAALSRNG DWGVDPTWDG RSRPSPNPIF LVESAEPIIW TRPQDITVPT 
SGVEKEKSIV RSISGDPPFG VGPWGGIVKL KVGDCFE