Gene Plim_3922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3922 
Symbol 
ID9140640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp5038701 
End bp5040491 
Gene Length1791 bp 
Protein Length596 aa 
Translation table11 
GC content57% 
IMG OID 
Productputative DnaK-related protein (molecular chaperone) 
Protein accessionYP_003631932 
Protein GI296124154 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACATC AATTTGCCGT CGGCATTGAT CTGGGAACAA CCAACAGTGT GGTTTCCTAC 
GTTCGTCTGA GTGATGAAAA GCCAGATGTC GGGCTGCTGC CGATTCCACA ACTCGTCGCG
CCTCAGACAA CGGAAGCACG CACTTCACTG CCGTCGTTTC TGTACTGTGC GGGGCCACAT
GATGCTCCTG GTTCGCTCGA TGTTCCCTGG AGTAAAGATC GCGATTTCAG TGTGGGCGAA
CTGGCTCGCC GGCAGTCGGC CGATTACCCC GAGCGAACGG TCATGGCCGC CAAAAGCTGG
CTGGGACATA GCAAGGTGGA TCGTCATCAA GCCCTGCTGC CGGTCGGAAG CGAAGAGAGC
ACGACGGGGA ATGTCACGAA GATTTCGCCG GTCACCGCTT CCCGGAGATA CCTTGAGCAT
CTGGTGAGTG CCTGGAAGCA GGCGTTTCCC GATGCGCCGA TCAGCGAACA ACTGGTCGTG
CTGACTGTCC CCGCTTCGTT TGATGCCAGT GCTCGAGAAT TGACTCGTGA AGCGGCTTTT
GCCGCGGGTT TACCTGATTC GCTGATTCTT CTTGAAGAAC CACAGGCTGC TGTCTATGCC
TGGCTGACGA GCCAGGGAGA GAAATGGCGC AAGCAACTCA AGGTGGGGGA AACACTTCTC
GTCTGTGACG TGGGTGGCGG TACCACAGAT TTAACCATTG TGCAGGTGCT TGAAGAAGGT
GGAGAGCTTT CTCTTCAGCG GATGGCCGTG GGAAACCATC TGCTGGTCGG CGGCGATAAC
ATGGATCTGG CACTGGCCTT TCATGTGGCG GAATTGTTTC AGTCCAAGGG GGTACAACTC
GATCCGTGGC AATCGATTTC TCTCTGGCAT ACCTGCCGGC AGGCTAAAGA AGTGCTGCTG
GCCCCTGATG GCCCCAAAAC GCACACCATC TCGATCAAAG GACGGGGCAG CAAGCTGATT
GGCGGTGCCG TGAGTGTCGA GGTGGATCGA GCCGCTGTGG CACAGCTATT GACGGATGGG
TTCTTCCCGG AATGTTCGCT GGATAGCCTG CCGCAAAAAC GTCGGCAATC GGGTTTTCAG
GAACTGGGAT TGCCCTATGA AACCGATACC GGCATTACCC GGCATGTGAC GGCTTTTCTG
GCGACACATG CTGCCGGTGT TTCGACGGGG CCCACTCATC TGCTGCTGAA TGGTGGTGTC
TTCAAAGCTC CTGCGCTGGC TCAGCGATTG GCTCAGGTTC TCGGAAGCTG GTATCCGGCC
ACCCCGGTAA AACCTTTGGC AGGGGAACCA GATCTTGATC ATGCAGTCGC TCGCGGTGCG
GCCTATTACG GCTGGGCCAA GCAGCATGGG GGGGTTCGCA TTCGTGGTGG GACAGCCCGC
TCGTACTATG TGGGAATTGA AACAGCAGGG CTGGCTGTTC CCGGGGCTCC CAGGCCTTTG
CGCGCGTTAT GCGTTGTGCC ATTTGGGATG GAAGAAGGGA CTGAGGTGGA TGTCCCTTCC
GACCCCATTG GCTTGATTGT GGGCCAGCCC GCACAGTTCC GCTTCTTCAG TTCATCGGTC
CGCAAGGATG ATCGTGCGGG AAGTCGACTG ACAGCGTGGT CGCCCGATGA TCTTTCAGAA
ACCGACTCAC TGGAAACGAT GCTTTCAGCA GGGGATTCGG CCGAGGAGCA CTATGTCCCC
GTCAAGTTCC ACTCCAAGAT CACCGAACTT GGAGTGTTAG AACTCTGGTG TGTCAGCACA
CGCAGCGAAG GGAAGTGGAA ACTCGAATTC AGCGTACGAG ATGAGGATTG A
 
Protein sequence
MAHQFAVGID LGTTNSVVSY VRLSDEKPDV GLLPIPQLVA PQTTEARTSL PSFLYCAGPH 
DAPGSLDVPW SKDRDFSVGE LARRQSADYP ERTVMAAKSW LGHSKVDRHQ ALLPVGSEES
TTGNVTKISP VTASRRYLEH LVSAWKQAFP DAPISEQLVV LTVPASFDAS ARELTREAAF
AAGLPDSLIL LEEPQAAVYA WLTSQGEKWR KQLKVGETLL VCDVGGGTTD LTIVQVLEEG
GELSLQRMAV GNHLLVGGDN MDLALAFHVA ELFQSKGVQL DPWQSISLWH TCRQAKEVLL
APDGPKTHTI SIKGRGSKLI GGAVSVEVDR AAVAQLLTDG FFPECSLDSL PQKRRQSGFQ
ELGLPYETDT GITRHVTAFL ATHAAGVSTG PTHLLLNGGV FKAPALAQRL AQVLGSWYPA
TPVKPLAGEP DLDHAVARGA AYYGWAKQHG GVRIRGGTAR SYYVGIETAG LAVPGAPRPL
RALCVVPFGM EEGTEVDVPS DPIGLIVGQP AQFRFFSSSV RKDDRAGSRL TAWSPDDLSE
TDSLETMLSA GDSAEEHYVP VKFHSKITEL GVLELWCVST RSEGKWKLEF SVRDED