Gene Plim_3899 details

Gene Information

• Locus tag: Plim_3899
• ID: 9140617
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 5011356
• End bp: 5013380
• Gene Length: 2025 bp
• Protein Length: 674 aa
• Translation table: 11
• GC content: 56%
• Product: peptidase M28
• Protein accession: YP_003631909
• Protein GI: 296124131

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAGTT TGTGCGTCTC TGGGCTGAAT ATGTCGATGG TGCTTTCGGG GTTGTGGGCA 
TTGCTGGCGG TGGTGTGCTC ACCTGCTGAG GGAGTGGCAG CCGAAGCGAC AAAGCTGGCG 
GAGTCGAAAG TTCGCATTCA GCAGGATGTG GGCGTACTGG CCAGTGATGA GATGGAAGGC 
CGGGGCGTTG GTACTGAAGG TTTGAATAAA GCGGCAGAGT TCATTCGCCA GGAGTTCCAG 
AAGGCGGGTC TTGATGTCAC GCGCGTGAAT GGGGGTGCCT TTCAGACATT CTCGCTGCCG 
ACAGGGACAA AGCTGGGTGA GCCGAATTCA CTCAAGCTGT TTTCACCCAA AGGTGAAGAA 
CTGGTGCTCG AAAAGGGACG CGACTTCGAG GTAGGTGCCT TTGGGACGAG TGGAAAATTC 
GAAGGGGAAG TTGCGTTTAT TGGCTATGGA CTCGAAGACA AAGAGGCCAA GTACGACGAC 
TATGCCGGGA TCGATGTAGC GGGAAAGGTT GTCGTTTGTT TTCGCAGAAC TCCCGGGCAA 
GGCCAGAAGG ATGGGCCATT TTCGCCGTCT AAAGGTGGCG GTCGGCAAGG TGATCTGCGG 
AGCAAGATTG TCGCTGCCAT GGCTCACAAA GCGGTCGCCA TTCTGTTTGT GAATGATCCT 
TATACGCTGG CCGACAAAGA ACGGATTCGC GAAGCAGCGA TCAAGAAAGC CGAAGGCAAA 
GTCGTGACCA GTGCCGAGCA ACTGGCCGAC GCCAGTCATG AGGATCAATC GGCCAAGCTG 
ACGGCTTTGA AGGATGCTGT CACGCAATTC CGCCGCTCGC GGGATGCAGC AACGAGTCCT 
GTGGATGAAC TCATGCCTTT TGGTTATGCG GCTGCGAATG ATGGCGAGAG TCTCCCCGCG 
TTTCATTTGC GAATCGATTT TCTCAACCAG ATGCTGCGCA GTGTGGGTTC GGCCAATGCT 
GTGGAACTCG CCGAAGAGAT TGATGCGACG ATGACACCAC GCAGCAGGGT TCTCACGGGC 
TGGAAGGCCC AGGGAGAAGC CACAGTCATC CGCCAGAGTG CCGATGTGCA TAACGTGATT 
GGAGTGCTGG AAGGCGAAGG GCCTTTGGCG AATGAAACGG TGGTGATCGG TGCGCACTAC 
GATCATGTGG GGCGTGGTGG TTCCGGTTCG CTGGCACCGG GCTCGACAGA TATTCACAAC 
GGGGCTGATG ACAATGCTTC CGGAACAGCC GTTCTGATCG AAGTGGCCCG GTTACTGGCT 
GCTCAGCCGA AAAAACCTGC CCGTCGTGTG GTGTTTATGG CATTTACCGG TGAAGAGCTG 
GGGCTGTTGG GTTCGGCACG ATATTGCAAA GAGCCGATCT TCCCGCTGGA TGAGACCGTG 
GCCATGCTCA ATATGGATAT GGTCGGGCGG CTGCAGGAGA ACAAGCTGAC TGTGTTTGGT 
GTGAAGACCG CGAAGCAGTT CGAAGAGTGG CTGCGCGAGG GCAATAAGAC AACAGGTTTT 
GAACTCATCG AGAAGCCCGA AGGTTTTGGC CCGAGTGATC ATTCATCGTT CTACACGAAG 
AAGATCCCGG TGCTGCACTT CTTCACCGGG TTACATCCCG ATTATCACCG CCCCTCGGAC 
GATACGGATA AGCTTGATGT CGATGGCATG ACGCGCGTGG CGACTCTCGT CAATGAGATC 
GCTCAAGTCG TTATTAACAC TCCTGCCCGG CCTGAGTATG TCGAAGTGAA AGGCTCGGCC 
AATGTGGGAC GTTCAGGGAA CAGGCCTTAT GTCGGGACGA TCCCGGATTT TGGCGTTCAG 
GAACCGGGCT ATGCGATCAG TGGGACAGCA CCAGGTTCAC CAGCCGACAA GGCCGGGCTG 
AAGCCTGGCG ATCTCGTGAT TGAAGTGGGT GGCAATAAAG TGACCAACCT GGATGACTTC 
GACTTAGCAC TGCGGAAGTT CAAGGCCGGC GACAAGGTCG ATTTCACCGT GAAACGCAAG 
ACCGAGACCC TCAAGCTTCC CCTGGAACTG GCACCACCCC GGTAA 

 

Protein sequence

MKSLCVSGLN MSMVLSGLWA LLAVVCSPAE GVAAEATKLA ESKVRIQQDV GVLASDEMEG 
RGVGTEGLNK AAEFIRQEFQ KAGLDVTRVN GGAFQTFSLP TGTKLGEPNS LKLFSPKGEE 
LVLEKGRDFE VGAFGTSGKF EGEVAFIGYG LEDKEAKYDD YAGIDVAGKV VVCFRRTPGQ 
GQKDGPFSPS KGGGRQGDLR SKIVAAMAHK AVAILFVNDP YTLADKERIR EAAIKKAEGK 
VVTSAEQLAD ASHEDQSAKL TALKDAVTQF RRSRDAATSP VDELMPFGYA AANDGESLPA 
FHLRIDFLNQ MLRSVGSANA VELAEEIDAT MTPRSRVLTG WKAQGEATVI RQSADVHNVI 
GVLEGEGPLA NETVVIGAHY DHVGRGGSGS LAPGSTDIHN GADDNASGTA VLIEVARLLA 
AQPKKPARRV VFMAFTGEEL GLLGSARYCK EPIFPLDETV AMLNMDMVGR LQENKLTVFG 
VKTAKQFEEW LREGNKTTGF ELIEKPEGFG PSDHSSFYTK KIPVLHFFTG LHPDYHRPSD 
DTDKLDVDGM TRVATLVNEI AQVVINTPAR PEYVEVKGSA NVGRSGNRPY VGTIPDFGVQ 
EPGYAISGTA PGSPADKAGL KPGDLVIEVG GNKVTNLDDF DLALRKFKAG DKVDFTVKRK 
TETLKLPLEL APPR