| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3898 |
|---|
| Symbol | |
|---|
| ID | 9140616 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 5010462 |
|---|
| End bp | 5011163 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
|---|
| Protein accession | YP_003631908 |
|---|
| Protein GI | 296124130 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGTGG TGACGATGGC TTCCGGGCAA CAGAGCGCTC CGAGAAAAGT ACCTGCAGTC
GAAGCTGTCT GCTTTGACCT GGATGGGACG ATGTTCAATA CCGAGCATCT ATTTTTTGAA
GCCGGCGATA CAGTGCTTCA AAAATTTGAG CGGCGGATGA CCCGCGAAGT GATGGATGTG
ATCATTGGTC GCCGCCCGAT GGAGTCGTTC ACCCGGCTGG TCGAGTATCT GGCGATTGAT
GTCGATCCTG CTCATCTTTT AGAGATTTCT CGCGAGGCTC ATCATGAGCT GATCCGTGAG
AAGCTCGCAC CCATGCCCGG AGTGGTCGAG CTTCTGGGTG CTTTATCGAA GCGAGGAATT
CCGTGTGCAG TCACGACATC TTCACCACGG GATTATGCGC AGAGTCTTGT GGAACAGGCA
GGGCTGATGA GCCACTTTCA GTTTTTTCTC ACCTCGGCAG ATGTCTCTCA AGGGAAGCCT
CACCCGGAGA TCTATCTGAA GGCGGCCAGC ACCTTTGGAG TTCGTCCTGA GCAGATGGCG
GTGTTTGAAG ACAGCGCCGC AGGGACGCGG GCGGCTGTGC TGGCCCGGGC AAGAACCATT
GCGGTTCCTC ATGAGTTCAC TGCCAGCCAT GACTTTACGG GGGCCGAGTT ACGGGTCGAA
ACGTTGACCG ACCGGCAGGT CTACGAGCTG CTGGCGGTCT GA
|
|---|
| Protein sequence | MSVVTMASGQ QSAPRKVPAV EAVCFDLDGT MFNTEHLFFE AGDTVLQKFE RRMTREVMDV
IIGRRPMESF TRLVEYLAID VDPAHLLEIS REAHHELIRE KLAPMPGVVE LLGALSKRGI
PCAVTTSSPR DYAQSLVEQA GLMSHFQFFL TSADVSQGKP HPEIYLKAAS TFGVRPEQMA
VFEDSAAGTR AAVLARARTI AVPHEFTASH DFTGAELRVE TLTDRQVYEL LAV
|
|---|
| |